Bacillus sp. X1(2014): HW35_16995
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Entry
HW35_16995 CDS
T03242
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gst
Bacillus sp. X1(2014)
Pathway
gst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HW35_16995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gst03019
]
HW35_16995
Messenger RNA biogenesis [BR:
gst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HW35_16995
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
UPF0154
Motif
Other DBs
NCBI-ProteinID:
AIM17742
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All DBs
Position
3276954..3278513
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AA seq
519 aa
AA seq
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MEPNTILSILLGLIVGAVVGYFIRRSIAEAKIAGARNAAEQILEDAKRDAESLKKEALLE
AKDEIHKLRTEAEREVRERRNELQKQENRLLQKEENLDRKDETLNKREILLEKKDDSLNQ
RQQHIEEMESKVDELVRTQQAELERISGLTREEAKAIILERTEQELAYDTAMMIKESENR
AKEEADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARLALEKLVQDGRIHPARIEEMVEKSRREVDEHIRE
VGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSIEVAQLSGLLAAELGQDETLA
RRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTAPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIIVRPDTIDD
LAAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaatacgatcctctccattttgcttggccttatcgtcggtgccgttgttggc
tattttattcgtagatccattgctgaagcaaaaattgcaggtgctagaaatgctgcagag
caaattctagaagatgctaaacgcgatgcagagtcgcttaaaaaggaagctctgctagaa
gcaaaggatgaaattcacaagcttcgaactgaagcagaacgtgaggttcgtgaacgaaga
aatgaactgcaaaaacaagaaaaccgtttactgcaaaaagaagagaatttagatcgaaag
gatgaaacgttaaataagcgtgaaattcttttagaaaagaaggatgattctctaaaccaa
agacaacagcatattgaagagatggaaagcaaagtggacgagttggtacgtacacaacaa
gcagaactcgagcgaatttcaggcttaactcgtgaggaagcgaaagcaatcattcttgag
cggaccgagcaagaacttgcttatgataccgccatgatgattaaagaaagcgaaaatcgt
gcgaaagaggaagcagacaaaaaggcgaaggaaattctttcgcttgcgatccagcgctgt
gctgctgaccatgtagcagagacaactgtatcggttgttaaccttccaaacgatgagatg
aagggccgaattattggacgtgaaggacgaaacattcgtacacttgaaaccttaacagga
attgatctaattattgatgatactcctgaggctgttattctatcaggtttcgatcctatt
cgtcgtgaaacggctcgcttggcccttgaaaagcttgtacaggatgggcgcattcaccct
gcgagaattgaggaaatggtcgaaaaatcccgccgggaagtggatgagcatatccgcgaa
gttggtgaacaaactacatttgaagtgggggttcacgggcttcatccagaccttatcaag
attcttggccgtttgaaattccgtacaagctacggacaaaatgtgttaaagcattcaatc
gaggtagcacaactttccggtttgcttgccgccgagcttggacaggatgaaacattggcc
agacgtgcaggtctattgcatgatatcggaaaagcgattgaccatgaagtagaaggaagc
catgttgaaatcggggttgaacttgctacgaaatataaggaacaccctgttgtcatcaat
agtattgcttcccatcatggtgatacagctccaacatcgatcattgctgttcttgttgcg
gcagcggatgcattatccgccgcaagaccaggagcgcgcagtgaaacattggaaaactat
atccgtcgcctggaaaagcttgaagagatttctgaatcctatgaaggggttgaaaaatct
tttgccattcaggctggtcgtgaagtacggattattgtaaggccggatacaattgatgat
cttgctgcacatcgattagctcgtgatattcgcaagcggattgaagaagagcttgattat
ccgggacatattaaagtaacagttatccgtgaaacacgggctgtagaatatgcaaaataa
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