Gavia stellata (red-throated loon): 104256405
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Entry
104256405 CDS
T08384
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gste01002
]
104256405 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104256405 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gste04147
]
104256405 (USP13)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104256405 (USP13)
Peptidases and inhibitors [BR:
gste01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104256405 (USP13)
Ubiquitin system [BR:
gste04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104256405 (USP13)
Exosome [BR:
gste04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104256405 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
104256405
NCBI-ProteinID:
XP_009809124
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
VYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGLRDNDIKPRVSEWEVIQEAGVKLKP
MYGPGYTGMKNLGNSCYLNAIMQAIFSIPEFQRAYVGNLPRIFDYSPLDPTQDFNTQMAK
LGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGISPRMFKAFVSKGHPEFSSNRQQDAQ
EFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQSRKVRYTERVDYIMQLPVAMEAAT
NKDELIAYELKRREAEAARRPPPELVRAKIPFRACLQAFTEPNNVEDFWSSALQAKSAGV
RTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDMPDFLDINHLRARGLQPGEEELPDI
APPIIIPDDPKDRMTNHFVESLDIDESSVMQLAEMGFPLEACRKAVYYTGNLGAEVAFNW
IIAHMEEPDFAEPLVMPAFGEVASSGAAAFGAVGLDNQPPEEMVAIIISMGFQRILAIQA
LKATNNNLERALEWIFSHPELEEENEPALDMMNMENNTNANILAETGSEGPRIKDGSGRY
ELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDIRVCASERPPKDLGYIYFYHRIPS
NT seq
1796 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcctttgatgaagaggagccagttttagatccacatatagcaaaacatttgg
cacactttggaattgatatgctgcagatgcaagtgacagagaatgggctaagagataatg
atataaaaccaagagtctctgaatgggaagtgattcaggaagctggcgtgaaactcaagc
ccatgtatggcccaggatacacgggcatgaagaacctgggaaatagctgctacctcaatg
ctatcatgcaagccattttcagcatcccagagttccagcgagcgtatgtgggaaaccttc
cacgaatatttgactactctcctcttgatccaacgcaagatttcaacactcagatggcta
aattgggacatggcctcctttcaggccagtactctaagccacccatgaaatctgagctta
ttgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatctccccgaatgt
ttaaagcttttgtaagtaaaggccacccagaattttcctccaatagacaacaagacgcac
aggaatttttcctgcatcttataaatctagtagagaggaaccctgtgggttcagaaaacc
ctagtgatgttttccggttcctggtggaagaacgcacacaatgctgccagtccagaaagg
tccgctacacagagagggtggactatatcatgcagttacctgttgccatggaggcagcaa
caaacaaagatgaattaattgcctatgaattgaagaggcgagaagcagaagctgcaagga
gacctccaccagagcttgtccgtgccaagatcccatttcgtgcatgtctgcaggccttta
ctgaaccaaacaatgtagaggatttctggagcagtgcccttcaagcaaaatctgcaggag
ttaggacttctcgttttgcttcattccctgagtacttagtggtgcagataaagaaattca
cctttggccttgattggatacccaaaaagcttgatgtttctatagacatgccagatttcc
tagatatcaaccaccttcgggccaggggtctccagccgggagaagaggaacttccagaca
ttgctcctcccattatcattcccgatgacccaaaagatcgtatgacaaaccatttcgtgg
agtctctagatattgatgagtcttcagttatgcaactggcagaaatgggtttccctttgg
aagcatgtcggaaagctgtgtactatacaggcaacctcggtgctgaagtcgccttcaact
ggattattgcacacatggaagaaccagactttgctgagccattggtcatgcctgcatttg
gagaagttgcttccagtggagcagctgcgtttggagctgttgggctagataaccaacctc
ccgaagagatggttgcaattatcatttccatgggcttccaaaggattctagcaattcaag
cactcaaggcaacaaacaataatttggagcgtgcactggaatggatcttcagccaccctg
aactcgaggaagaaaatgagcctgctttggacatgatgaatatggagaacaatactaatg
ccaatatacttgcagagacagggtcggagggacccaggatcaaagatggatctggaagat
atgagctgtttgggttcatcagccacatggggacatccacaatgagtggccactatgttt
gtcatctcaaaaaagaaggaagatgggtgatctacaatgacattagagtctgtgcctcag
aacgacctcccaaagaccttggctacatttatttttaccacaggataccaagttag
DBGET
integrated database retrieval system
