Gavia stellata (red-throated loon): 104259171
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Entry
104259171 CDS
T08384
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104259171 (DDX1)
03016 Transfer RNA biogenesis [BR:
gste03016
]
104259171 (DDX1)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104259171 (DDX1)
Spliceosome [BR:
gste03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104259171 (DDX1)
Transfer RNA biogenesis [BR:
gste03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104259171 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
104259171
NCBI-ProteinID:
XP_009812790
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
TDKFGFGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIP
PHIRNQALFAACVLKNAELKFNFGEDDFKFPPKDGYIGLCKAPDGNVVKSQHSGNAQVVQ
TQNLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQG
VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGK
RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERL
GKNHIRTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDC
DNMEQYFIQQGGGPDRKGHQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGI
DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCY
NTRLKEEGGCTIWYNEMQLLGEIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGG
LYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF
NT seq
1748 nt
NT seq
+upstream
nt +downstream
nt
gcactgataaatttgggtttggctttggtggcactggtaagaaatctcacaacaagcaat
ttgacagctatggtgaggaattcactatgcatgatacaattgggtgttatctagacatag
ataaaggacaaataaaattttccaaaaatgggaaggaccttggccttgcgtttgaaatcc
caccacacataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattga
aattcaattttggtgaagatgacttcaagtttccaccaaaagatggctatattggtcttt
gcaaggctcctgatggtaatgttgtaaaatcacaacactcaggaaatgcacaagtggttc
aaacacagaaccttccgaatgctccaaaagcattgattgtagaaccatcaagagagcttg
cagaacaaactttgaacaatgtgaagcagttcaaaaaatatgttgataatcccaaattaa
gggaactgttgattattggtggtgttgctgcaagagatcaactctctgtactggaacaag
gagtggatattgtcgttggaactcctggaagactggatgacctggtctcaacgggaaagc
ttaatttatctcaagttagattcctggttctggatgaagctgatggcctccttctccaag
gttattcagatttcataaacaggatccacagtcaaatccctcagataacttcagatggaa
agagacttcaggtgattgtgtgctctgcaacactgcattcttttgatgtgaaaaaactat
ctgaaaagatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctg
aaactgtacaccatgtagttgtgcctgtaaatccaaaagctgacaaactctgggaaaggc
ttggcaagaatcatatcagaactgatgaagtacatgcaaaagacaatacgcgacctggtg
ctaacactccagaaatgtggtctgaagctattaaaattctaaaaggagaatacaccgttc
gggcaatcaaagagcacaagatggaccaagccattattttctgcaggactaaaatagatt
gtgataatatggagcagtacttcatccaacagggcggaggccctgataggaaaggacatc
agttctcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcaaaacctgg
aaagatttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaa
ttgatattcatggtgttccatatgttatcaacgtcacactccctgatgaaaaacagaact
atgttcatcgaattgggagagtaggcagagctgagaggatgggtttggcaatctcccttg
tggcaaaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgtt
acaatactagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgc
tgggggagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaag
taccagtagatgactttgatgggaaagttacatatggacagaaaagagctctgggtggtg
ggctgtataaaggccatgtggatattctggcacctacagtccaagagttggctgcccttg
aaaaggaggctcagacgtctttcttgcatcttggctatcttcctaaccagctgttcagaa
cattctga
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