Gavia stellata (red-throated loon): 104260477
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Entry
104260477 CDS
T08384
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gste01002
]
104260477 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104260477 (USP47)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104260477 (USP47)
Peptidases and inhibitors [BR:
gste01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104260477 (USP47)
Ubiquitin system [BR:
gste04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104260477 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
104260477
NCBI-ProteinID:
XP_009814508
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MFWSCRQSIFAEMKKRFSQVESAAEEPRVLCIIQDTTNSKTVNERVTLNLPASTPLKRLF
EDVASKVGYVNGTFDLVWGNGDNVTDTTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQ
PHIMPEESGTTDDSAQDRFIGPLPREGSVGCTNEYVSQNYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYRWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFVSST
NAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVVDLKTESVAPPISV
RAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFV
ESSESLDRHVAYTESHLWKLLDRHANTIRLYVSLPEQSPGSQFRQAVYQKSSGDSGNLDE
ACERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTEASDFENIESPLNE
IDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNV
DNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYF
KSEPYAADEGSGEGQKWLVVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFES
VRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLIDAVFAKGMTVRQ
SKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILD
GAEKMKSMSQLAVLSRQWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAK
GRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNE
LMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagttgcagacaaagtatctttgctgaaatgaagaagagattttcacaggtg
gaaagtgctgctgaggaacccagggtgctgtgtataatacaagataccacaaattccaag
acagtgaatgagcgtgttaccttgaacttgccagcttctacaccacttaaaaggctgttt
gaagatgtggcttcaaaagtgggctacgtaaatggaacttttgatttagtgtggggaaat
ggagataatgtaactgatacgactccaatagatcagaacagtgacaaaactattcttgat
gctggttttgagccagggaagaagaactttctccatttgacagacaaagatggtgagcag
cctcatataatgccggaggagtcaggtacaacagatgacagtgcacaggacagatttata
ggccctcttccaagagaaggctctgttggctgtaccaatgaatatgtcagtcaaaactac
tcttattcatcagtcctgagcaaatcggagacaggttatgtggggctagtaaatcaagca
atgacttgctacttgaatagccttctacaaacacttttcatgactcctgaatttagaaat
gcattatacagatgggaatttgaagaatctgaagaggatcctgtgacgagtatcccctac
cagcttcaaagactgtttgttttactgcagaccagcaaaaaaagagcaattgaaacaaca
gatgttacacggagttttggatgggatagtagtgaggcatggcagcaacatgatgtacag
gagctttgtagagtcatgtttgatgctttggagcagaaatggaagcaaacagaacaggcc
gatcttataaatcagctgtatcaaggcaaactgaaggactatgtaagatgtctagaatgt
ggctatgaaggctggagaatcgacacttacctggatattcctttggtcatccggccgtat
ggctccaaccaggcgtttgctagcgtggaagaagcactgcatgctttcattcagcccgag
attcttgatggccccaatcagtatttttgtgaacgatgtaagaagaaatgtgatgcaagg
aagggtctgcggttcttgcattttccatatctgctgacattacagctgaaaagatttgac
ttcgattataccactatgcacagaattaaactcaatgatcgtatgacttttccggaggag
ttagacatgagtgtcttcattgatgttgaagatgagaagtctcctcagactgagagttgc
actgatagtggagctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgatttt
tctaatgatgatggagttgatgaaggaatctgccttgaaagcaacagtgcagcagaaaga
atttctaaagctggcagtgaaaagagttctttactgtatgagctcttttctgttatggtc
cattctggaagtgctgctggtggccattattatgcctgtataaaatcttttagcgatgac
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatatggtggatcttccggaagcagaggctattattccagtgcttttgttagctccaca
aatgcatacatgctgatatacagactgaaggatccaacgagaaatgcaaagtttcttgag
gcacatgagtatccagagcatattaaacaattggtacagaaagagagagaattggaagaa
caagaaaagaggcaacgtgaaattgagcgcaacacttgcaagattaaactgttctgcatg
catcctacaaaacaaataatgatggagaataaattagaggttcataaggacaggacactg
aaggaagctgtggaaatagcttacaagctaatggatttagaagaggctgttcctttggat
tgctgtcgtcttgtcaaatatgatgagttccatgactacttggaacgatcttatgaagga
gaagaggatacaccaatgggtttattactgggaggtgtcaaatcaacatacatgtttgac
ttactattggaaacaagaagacctgaccaaattttccagtgctataaacccggtgaggtc
atggtaaaggttcacgtagttgacctgaagactgaatctgttgctcctccaataagcgtc
cgagcttatttgaatcaaacagtttcagaatttaaacagctaatttcaaaggctacgcac
ctgcctgctgaaacaatgcgggtagtattagaacgttgctacaatgacttgcgtcttctg
aacgtttccagtaaaacactgaaagctgaaggcttttttagaagcaacaaggtatttgtt
gaaagctcagagtctttagatcgtcatgtggcatatacagagtctcatttatggaaactt
ttggatcgtcatgcaaatacaatcagactatatgtttcattaccagagcaatcgcctgga
tctcaatttagacaagcagtttatcagaagtctagtggagattcaggcaacttggatgaa
gcttgtgaaagagtaaaaggacctgtaggtaatatgaaatctgtagaggcaattctggaa
gaaagcaccgaaaagcttaaaagcttgtccctgcagcagcagcaggagggggataatgga
gacagcagcaaaagcacagaagccagtgattttgaaaacattgaatcacctttaaatgaa
atagactcttcagcatcagcagaaaacagagaacttgaaaaccaaattcagatttccgat
ccagaaaatctccagtctgaggaacggtcagattcagatgtaaataatgacaggagtaca
agttcagtggacagtgatatcctcagctccagtcatagcagtgatactttatgcaacgtg
gacaatgccccacttcccttggctaatggacttgattctcatagtatcacaagtagtagg
cgatcaaaagcaaatcaggggaagaaagaaacctgggacacagcagaagaagattctgga
acagatagtgaatacgatgaaagtggcaagagcagaggagaagcacaatatatgtacttt
aagtcagaaccctatgctgcagatgaaggttcgggagaagggcaaaaatggctggtggtg
catgttgataaaagaattacattgtctgccttcaagcaacatttggagccttttgttgga
gttccatcttctcacttcaaagtctttagagtctacgccagcaatcaagagtttgagagt
gttcggctgaatgagacactttcgtcattttctgatgacaataagataactattagactt
ggaagagcccttaagaagggtgaatacagagtcaaagtctatcaacttttggtaaatgag
ccagagccatgcaagtttcttatagatgcagtttttgctaaaggaatgactgtccgacag
tccaaagaggagctgcttcctcagcttcgagaacaatgtggcctagacttgacaattgac
aggtttcgcctgcgaaagaaaacgtggaagaacccaggcactgtgtttttggattatcat
atctatgaagaagatatcaatatttcaagcaattgggaggtcttcttagaaatacttgat
ggagcagaaaagatgaaatccatgtcacaactcgctgttttatcaagacagtggaggcca
tcagagatgaaactagattctttccaggaagtagtactagaaagcagcagcgttgaagaa
ttaaaagagaagctgagtgaaataagtggaatacccttagaaaacatagaatttgcaaag
ggtagaggaacgtttccatgtgacatttccatattagagattcaccaagacttggactgg
aatcctaaagtatctacattgaatgtctggcctctgtacatttgtgatgatggtgcagta
atattttatagggataaaactgaagaattaatggaattaacagatgagcagagaaatgaa
ctgatgaaaaaagaaagcagcagactccagaaaaccggacaccgggtaacctactctcct
cgtaaagaaaaagcactaaaaatttatctggatggagcaccaaataaagatttgactcaa
gactga
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integrated database retrieval system
