Gavia stellata (red-throated loon): 104260759
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Entry
104260759 CDS
T08384
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gste03036
]
104260759 (KDM1A)
Enzymes [BR:
gste01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
104260759 (KDM1A)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
104260759 (KDM1A)
REST complex
104260759 (KDM1A)
Histone demethylases
104260759 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
2-Hacid_dh_C
Sec10_N
GIDA
MurD-like_N
IlvN
Lycopene_cycl
AgI_II_C2
DUF6827
MCRA
MutS_IV
CdiI_2
Motif
Other DBs
NCBI-GeneID:
104260759
NCBI-ProteinID:
XP_009814867
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
VEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEA
TIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAA
ARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMEL
AKIKQKCPLYEANGQADTVEVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLG
QALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVK
PPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQIL
DWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTA
VRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTS
AVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAG
EAAGIMENISDDVIVGRCLAILKGIFGSSAVPQ
NT seq
1721 nt
NT seq
+upstream
nt +downstream
nt
gtgtggagggtgcagctttccagagtagacttccacatgaccgtatgacatctcaagaag
ctgcctgcttccctgatataatcagtgggccacagcagactcagaaggtgtttctgtaca
tcaggaaccgcaccctgcagctctggttggataacccaaagattcagttgacatttgagg
caactatccaacaattagaagcaccttataatagtgatacagtgctcgttcacagagtgc
acagctatctggagcggcatggtctaataaactttggtatctacaaaagagtgaagcccc
ttccaaccaagaagaccggaaaggtgatcattatcggttctggagtctctgggttggcag
cagctcgccagttgcagagttttggaatggatgtcacagttctggaagccagggaccgag
taggaggaagagtcgctacctttcgcaaagggaactatgttgctgatctaggagcaatgg
tggtaacaggacttggaggaaatcccatggctgtggtcagcaaacaagtgaatatggaat
tggctaagatcaaacaaaaatgcccactttatgaagcaaatggacaagctgacactgttg
aggttccaaaagagaaagatgaaatggtggagcaagaatttaatcgtctgctggaagcca
cctcctatctcagtcatcagctggattttaatgttctcaataataagccagtctccctag
gtcaggctctggaggttgtcatacaattgcaggaaaagcatgtaaaggatgagcagattg
aacactggaaaaaaattgtaaaaacacaggaggaattgaaggatcttcttaacaagatgg
tgaatttaaaagagaagattaaagaacttcatcaacagtataaggaagcatcagaagtga
agccacctcgggatattacagcagagttccttgtgaaaagcaaacacagagatctgactg
cactttgcaaggagtatgatgaattggcagaaacacaaggaaagctggaagagaagttgc
aagaacttgaagccaatccaccaagtgatgtatatctgtcatcaagagacaggcaaatac
tcgactggcattttgcaaacctagaatttgctaatgctacacccctgtcgacactttcac
tgaagcactgggaccaggatgatgactttgaattcacaggcagtcacttgactgtgagga
atggatattcctgtgtgcctgtagccttggcagaagggttggatattaaattaaacacag
cagttcgacaggttcgctatacagcatcaggctgtgaagtgatagctgtaaatacccgat
ctactagccagactttcatttacaaatgtgatgctgtgctatgtactcttcccttgggag
tattgaaacagcagcctccagcagtacagtttgtgccacctcttcctgaatggaaaactt
ctgcagtgcagcgtatgggatttggcaatctcaacaaggttgtgttgtgttttgatcgtg
tcttctgggatccgagtgtcaatttgttcggtcatgttggtagcactactgcaagcagag
gagaacttttcctgttttggaacctgtacaaagcaccaattttgttggccttggtagcag
gagaagcagcagggatcatggaaaatatcagcgatgatgtcattgttggacggtgccttg
ccatcctcaaaggcatatttggtagcagtgctgtgccacag
DBGET
integrated database retrieval system
