Gavia stellata (red-throated loon): 104263231
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Entry
104263231 CDS
T08384
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104263231 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104263231 (DDX46)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104263231 (DDX46)
Spliceosome [BR:
gste03041
]
Complex A
U2 snRNP components
U2 related factors
104263231 (DDX46)
Complex B
104263231 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104263231
NCBI-ProteinID:
XP_009818151
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
HYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRSRSRDRK
RQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEKTEGV
EVSKEKKKDKEDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGSEVEDEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLELEGI
TVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVI
EEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDS
IINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAPT
PSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVS
AKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWKVTSK
EALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEE
LIRLQNSYQPTNKGRYKVL
NT seq
3121 nt
NT seq
+upstream
nt +downstream
nt
gcattatcggaagcgctctgcgtcacgtggacgctctggtagccgttctagaagtcgttc
tccgtctgacaaaagaggaaaacgcggagaagacagacgctctagaagtagagatcgaga
acgtagacgtgagaggtcacgcagtagggacaagagaaggtctcgatcgcgtgacagaaa
gcgtcaaagacgttcaagaagtagagaaagggaacgtagccgagagagaagaagatcccg
gagccgagagaggaggcgctctagaagcaggagtagaggtagacgatctcgatcctccag
tccaagcaagaacaggaaaacagaaaacagatcaagatctaaagaaaagacagaaggtgt
ggaagtttccaaagaaaagaaaaaagacaaagaagacaaagaagaagagaaggataaaga
tgctactacaaataccgtggccactgagaattttgatcagaacaaactagaagaagaaat
gagaaaacgaaaagaaagagtggagaaatggagggaagaacaacgcaagaaagctatgga
aaacataggagaactgaaaaaagaaattgaagagatgaaacaggggaaaaaatggagttt
agaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaagaaggcagtgaggt
tgaagatgaagagttagatcctttggatgcttatatggaagaagtaaaagaagaggtcaa
gaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaagaaatccggaccaac
tgttaccaaggtagtaaccgtggtgacaaccaaaaaggcagctgtggagtcagaaaagaa
gaaaggggagctcatggagaatgaccaagatgcaatggagtattcctcagaagaggagga
agttgatcttcagactgccctgactggctatcagaccaagcagagaaagctgctagaacc
agtggatcatggaaagatagaatatgaacctttcaggaaaaacttctatgttgaagtgcc
agaactagctaaaatgactcaagaagaggtgaatgtgtacaggctggagttggagggaat
tacagtcaagggaaaaggctgccccaaaccaataaaaacctgggtacagtgtggtatttc
catgaagattctcactgccctcaaaaaacatggctatgaaaagcccactcccattcaaac
ccaggctatcccagcaattatgaatggacgtgatttgattggcattgctaaaacaggaag
cggaaaaactattgcatttctgttgcccatgttcagacacattatggatcagagagcatt
agaagaaggagaaggtcccatagctgtcattatgacacctactcgcgagttggctttgca
gattaccaaggagtgtaagaaattctcaaagacacttgggcttcgagttgtctgtgttta
tggaggaacaggaatcagtgaacagatagctgaactcaaaagaggtgctgaaattattgt
ttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgggtgacaaatct
tcgtagagtcacttatgttgtacttgatgaagcagacagaatgtttgacatgggttttga
gcctcaggttatgcgcattgtagacaacgtcaggcctgatcgtcagactgtcatgttctc
tgctacttttcccagagctatggaggcattagctcggagaatcctaagtaaacctataga
agtgcaggttggaggcagaagcgttgtctgttctgatgtggagcaacatgttattgtcat
agaagaggagaacaagtttttgaagttactggagctactgggacactatcaggagaaagg
atcggttatcatatttgtagataaacaagaacatgctgatgggttgttgaaagatttaat
gagagcctcttatccttgcttgtctcttcatggaggtattgatcagtatgacagggacag
cataattaatgatttcaagaatggaatttgcaaacttctggtggccacatctgtagcggc
aaggggcttagatgtaaaacagttgatgctggtggtcaattatagctgtcccaaccatta
cgaagattacgtacaccgagcaggccgaactggacgagctggcaataaagggtatgcata
tacattcattactgaggatcaggcacggtatgctggtgatatcattaaggctttggaact
gtctgggaatccaattcctactgatttggagaagctctgggctgacttcaaagaccaaca
gaaggctgagggaaagctgattaaaaaaagcagtggattctctggcaaaggttttaaatt
tgatgaaacagaacaggctttggctaatgaaagaaagaagctacaaaaagcagcccttgg
cttgcaagattcagatgatgaagatacagctgttgatatcgatgaacaaattgaaagcat
gttcaattcaaagaaaagagtaaaagacatggcagcaccaggaacatcaaatgctcctac
gccgtcggctgggaatgcagaaaaattggaaattgctaaaagattggctttgagaatcaa
tgcccagaagaatcttggagcagaggcacaagtattggtccccttccactttaaggatgt
aatgcagcaggctacaaacgctatcctgagaggaggcacaattcaagctcctactgtatc
tgccaagaccattgcagagcaactggctgaaaaaatcaatgctaagctcaattatgtacc
catagagaagcaggaggaagagaaacaggatggaggacaaaatgaatccttcaagagata
tgaagaagaattagagatcaatgacttcccacagactgccaggtggaaagttacctccaa
agaagcgctacagagaatcagtgaatattctgaagctgctattacaatcagaggaactta
cttccctccaggcaaagaacccaaggaaggagaacgaaagatttatttggctatagaaag
tgccaatgaactggctgtacagaaagcaaaggcagaaatcacgcgacttataaaagagga
gctcatcagattgcaaaattcataccaaccaaccaacaaaggaagatacaaagttctatg
a
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