Geomonas subterranea: KP001_00010
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Entry
KP001_00010 CDS
T07936
Name
(GenBank) PKD domain-containing protein
Organism
gsub
Geomonas subterranea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Motif
Other DBs
NCBI-ProteinID:
QXE90972
LinkDB
All DBs
Position
741..4430
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AA seq
1229 aa
AA seq
DB search
MADYQLNGQGQYINYMQPGVDGFQNFLKGGNDANGNPYPKVEMSLWDQATMCGTCHVGGV
FYEEDRMGTRLPARTLADWGPAFTGAAPNLNPITATVWENYSTTGKDKSFVAMSPWVYPV
YMGMGGAPDPNLPDGGPMIVPYGWAPKDMTMANNNGGAPYTVKAGQLMMPNVKEMDCLFC
HLKGYDNVMTSVMVQAGSLSAAPTTGAGLFDMFSLSPTYMGYDPRNGKSAFYRIGAGNLP
PAFASYSSHEVVFLTAAVTENIKGKPDENNCHQCHASKTLKNFPEMFGVTGTSTGFLSSA
PMVYDPANGVGPLGKKMVNYDINSPLMQSGASPVLTGNNVQNFMMAGLNYPQASGPSGYN
TLDASKGEIGGGNPAMTGPLFYSTMDGKPVDQNTLKKSTMPFPRAEWFKRGDAWQAGQDV
HGSFGCAGCHFTGNSTDKNQCDPARGFDAASTIQDGLPAIKERQPVLEQGETLDAAIKKH
DTRNTMKRCEFCHVTGTDYNGNPIETYGAPNPNLAHANAGLLANLTQIVDKVGLHGDFGG
KGVPRESNFTTQEKGAVDGVQKPGGTILGRGNHLDVMDCTVCHVDKVSMAVRSLDATSGM
RFPAIVGTDPMKGMLGLFEDPTGMGAAATGMGGELKHWTPVVMWQPYGNMEGTLSWANKP
ADQRFQFRRKLYLTNPISAILFNNEGSTVDANGDGVTGGMLIGDDEATGLPTASTKPSLK
GYRDVFTGDVPNKNNTSGFELPIFDPWAMRELKSGFNFVPAPLSVIGAGFGGFGTPAGKT
DPTNGAFASLYGPNGMFSNDNWKYASVWSGAVVFTEPDQIRGYKQYRTAIKDATDGKSWM
NTSLTMIGAPFMVTHGVKPTDSYVKGKSCADCHAAGKGFFKGSFDMVGPAIPSTKSYDPS
TYPMTDANGNLVVDTATGEPVRGPAQGWTIPGDQGNMMMRPLEPIRIKAYKGDLRGYFES
YNKLGQPREVNFVHDVNVGGVDYSYASTIDRSEIAYPAEDGAIYYKVGQVNADGSVNGGA
QPLTGAAYATYLETEISPVLADYGIGIDPVATINPIADASATDLGVQVKQNADVALSAAP
AQMNAGSEVGSATYAWTTSDGTAVTNAGSRTGATVKFTTLGTKTITLKVTDEEGKVSQTS
TNVDVILAPVTIGWNGTTDVATFTTFPAGTASVKIAWGDGFSTTKSGTALTDPLTVRHLY
STGTAKTIKFYCYNGTGAQIGYQQATILP
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattatcagctgaacggtcagggccagtacatcaactacatgcagccgggcgtc
gacggcttccagaacttccttaaagggggcaatgacgccaacggcaacccgtatccgaaa
gtcgagatgtccctttgggaccaggcgaccatgtgcggtacctgccacgtgggtggcgtc
ttctacgaagaggacaggatgggcacccgcctgccggccaggaccctcgccgactggggc
ccggccttcacgggcgcggcaccgaacctcaacccgatcaccgcgaccgtgtgggagaac
tactccaccaccggtaaggacaagtccttcgtcgccatgtccccctgggtctacccggtc
tacatggggatgggcggcgctcccgacccgaaccttccggacggcggcccgatgatcgtc
ccctacggttgggcgcccaaagacatgaccatggccaacaacaacggcggggctccctac
accgtcaaggccggccagctcatgatgcccaacgtcaaggagatggactgcctcttctgc
cacctcaaaggctatgacaacgtgatgacctccgtcatggtccaggccggttccctttcc
gccgccccgaccactggcgccggcctcttcgacatgttctccctgagcccgacctacatg
ggttacgatccgagaaacggcaagagcgccttctaccgtatcggcgctggaaatcttccc
ccggcattcgcgagctactcctcgcacgaggtcgtcttcctgaccgctgccgtgacggag
aacatcaagggcaagccggacgagaacaactgccaccagtgccacgcttccaagacgctc
aagaacttccccgagatgttcggcgtcaccggcaccagcaccggcttcctctcctccgcc
ccgatggtgtacgacccggccaacggcgtgggccccctgggcaagaagatggtcaactac
gacatcaactccccgctcatgcagtccggcgcctccccggtcctcaccgggaacaacgtc
cagaatttcatgatggccggcctcaactatccgcaggccagcggtccctccgggtacaac
accctggatgcgtccaagggcgaaatcggcggcggcaacccggccatgaccggtccgctg
ttctactccaccatggacggcaagcctgtcgaccagaacaccctgaagaagtccaccatg
ccgttcccccgcgccgagtggttcaagcgcggtgacgcatggcaggccggccaggacgtt
cacggcagcttcggctgcgccggctgccacttcaccggcaactccaccgacaagaaccag
tgcgacccggcccgcggcttcgatgcggcctccaccatccaggacggcctgccggccatc
aaggagcgtcagccggtacttgagcaaggtgagacgctggacgcggccatcaagaagcac
gacacccgtaacaccatgaagcgttgcgagttctgccacgtcaccggcaccgactacaac
ggcaacccgatcgagacctacggcgcgcccaacccgaacctggcccacgccaacgcgggg
cttctggccaacctgacccagatcgtcgacaaagtcggcctgcacggcgacttcggcggc
aaaggggtacccagggagtccaacttcaccacccaggaaaaaggcgccgtagacggcgtt
caaaagccgggcggcaccattttgggccgcggcaaccacctcgacgtcatggactgcacc
gtctgccacgtcgacaaggtgagcatggcggtacgctcgctcgacgccacctccggcatg
cgcttccccgccatcgtcggcaccgacccgatgaagggcatgctcggcctcttcgaagac
ccgaccggcatgggcgctgcggcaaccggcatgggcggcgaattgaagcactggacaccg
gtcgtcatgtggcagccttacggcaacatggagggaacgcttagctgggccaacaaaccg
gccgaccagcgcttccagttccgccgcaagctgtacctgaccaaccccatcagcgcgatc
ctcttcaacaacgaggggagcaccgtggacgccaacggcgacggcgtcaccggcggcatg
ctgatcggcgacgacgaggccaccggcctccccaccgccagcaccaagccgtccttgaag
ggataccgcgacgtcttcaccggcgacgttcccaacaagaacaacacctccggcttcgaa
ctgccgatcttcgacccgtgggccatgcgcgaactgaagtccggcttcaacttcgtgccg
gctccgctctccgtcatcggcgcaggctttggcggcttcggcactccggccggcaagacc
gacccgaccaacggcgcgttcgcaagcctctacggcccgaacggcatgttctccaacgac
aactggaagtacgcttccgtatggagcggcgccgtcgtattcaccgagccggaccagatc
cgcggctacaagcagtaccgcaccgccatcaaggatgccaccgacggcaaatcctggatg
aacacctccctcaccatgatcggcgcaccgttcatggtcacccacggcgtgaaaccgacc
gacagctacgtcaagggtaaatcctgcgccgactgccacgcggcgggcaaagggttcttc
aaaggtagcttcgacatggtcggcccggccatcccgtcgaccaagagctacgacccgagc
acctacccgatgaccgacgccaacggcaacctcgttgtcgacacggcaacgggcgagccg
gtgcgcggccccgcccaggggtggaccatccccggcgaccagggcaacatgatgatgcgt
ccgcttgaaccgatccgcatcaaggcctacaaaggcgacctgcgcggctacttcgagagc
tacaacaagctcggccagccgcgtgaagtcaacttcgtccacgacgtgaacgtgggcggc
gtcgactacagctatgcatccaccatcgaccgctccgaaatcgcctacccggcggaagac
ggcgcgatctactacaaagttggccaggtcaacgctgacggctccgtcaacggtggcgcc
cagccgctgaccggcgcagcatacgcaacctacctcgagacagagatatcccccgtcctt
gccgattacggcatcgggatcgatccggtcgccaccatcaacccgatcgccgacgcaagc
gcaaccgacctcggcgtgcaggtgaagcagaacgccgacgtggctctctccgccgctccg
gcacagatgaacgccggcagcgaagtggggagcgcgacctacgcctggaccaccagcgac
ggcaccgccgtcaccaacgcaggctccaggaccggtgcgaccgtcaagttcaccaccctg
gggaccaagaccatcaccctcaaggtaaccgacgaagagggcaaggtcagccagaccagc
accaacgtcgacgtcatcctggcgccggtcaccatcggctggaatggcaccaccgacgtc
gccaccttcacgaccttcccggcaggcaccgcctccgtgaagatcgcctggggcgacggt
ttcagcaccaccaagagcggcaccgcccttaccgacccgctcaccgtgagacacctgtac
tcgaccgggaccgccaagaccatcaagttctactgctacaacggaactggcgcccagatc
ggctaccagcaggcaaccatcctgccgtaa
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