Geomonas subterranea: KP001_03030
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Entry
KP001_03030 CDS
T07936
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase family protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00521
Streptomycin biosynthesis
gsub00523
Polyketide sugar unit biosynthesis
gsub00541
O-Antigen nucleotide sugar biosynthesis
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
gsub01250
Biosynthesis of nucleotide sugars
Module
gsub_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KP001_03030
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KP001_03030
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KP001_03030
Enzymes [BR:
gsub01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KP001_03030
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QXE91535
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All DBs
Position
696059..696589
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AA seq
176 aa
AA seq
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MRFEPLPVPGAFLIEPDFIADDRGFFARTFCRAEFAAKGLNTNLVQCSVSFNKARHTLRG
MHYQVTPHEEAKLVRCTKGAIQDVIVDLRPDSPAFRRWASVELSAENHRGVYIPEGVAHG
FLTLDVDSEVFYQMSEFFQPECAAGARFDDAAFGIDWLAEPAVISGRDLGYPDFLK
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttcgagcccctgccggttcccggcgcgttcctcatagagccggatttcatcgca
gacgaccggggctttttcgcccgcactttctgccgggccgaattcgccgcgaaagggctc
aatacaaacctcgtgcagtgcagcgtttccttcaacaaggctaggcacacgctgcgcggc
atgcactatcaggtgacgccgcacgaggaggcgaagctcgtgcgctgtaccaaaggggcg
atccaggacgttatcgtggacctaaggcccgattccccggctttcaggcgctgggcatcg
gtggagttaagcgcggagaaccaccggggcgtctacatcccggagggggtcgcccacggt
ttcctgacccttgacgtcgacagcgaggtcttctaccagatgtccgaattcttccaaccg
gaatgtgcggccggggcccgcttcgacgacgccgcgtttgggatcgattggctcgcggag
cctgccgtgatctccgggcgtgacctcggctacccggactttcttaagtaa
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