Geomonas subterranea: KP001_16885
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Entry
KP001_16885 CDS
T07936
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
gsub
Geomonas subterranea
Pathway
gsub00010
Glycolysis / Gluconeogenesis
gsub00020
Citrate cycle (TCA cycle)
gsub00620
Pyruvate metabolism
gsub00650
Butanoate metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
gsub01120
Microbial metabolism in diverse environments
gsub01200
Carbon metabolism
gsub01210
2-Oxocarboxylic acid metabolism
Module
gsub_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP001_16885 (nifJ)
00020 Citrate cycle (TCA cycle)
KP001_16885 (nifJ)
00620 Pyruvate metabolism
KP001_16885 (nifJ)
00650 Butanoate metabolism
KP001_16885 (nifJ)
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
KP001_16885 (nifJ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_9
Fer4_16
Fer4
Fer4_8
Transketolase_C
Fer4_17
Fer4_6
Fer4_2
Fer4_10
Fer4_21
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
QXE90079
LinkDB
All DBs
Position
complement(3876202..3879918)
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AA seq
1238 aa
AA seq
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MSATRKTMDGNTAAAHVAYALSETAAIYPITPSSTMGEVADEWAAEGRKNIFGQVLNIKE
LQSEAGAAGAVHGSLVAGALTTTFTASQGLLLMLPNMYKIAGEQLPGVFHVSARAIATHA
LSIFGDHQDVMAARPTGFAMLCSSSVQEVMDLALVAHLAALEGSLPFLHFFDGFRTSHEV
QKIEVIDYQDMARLVNHDKLAAFRSKAMNPEHPELRGTAQNPDIYFQGRERANPFYEALP
RVVTDSMERVGQLTGRHYRLFDYIGHAEADRVIVTMGSSCETAEEVVQYLNSQGEKVGLV
KVRLYRPFDSNALLSVIPPTAGKITVLDRTKEPGAQGDPLYQDVCTAFLERGGQVPELYA
GRYGLGSKEFRPVHVKSIFDNMDGRPGKRHFTVGITDDVSDSSLPVEGTLSTTPEGTIQC
RFWGMGADGTVGANKAAIKIIGDNTDLYVQAYFSYDSKKSGGITVSHLRFGESPIQSTYL
VDAADFISCQKAPYVQIYDLLEGIKEGGTFLLNSPWNSVEAMEKNIPATMRRAIAQKKVR
LYNVDAISIAQSAGLGGRINMIMQTAFFKLSGVLPFERAVELLKDSIRKEYGRKGDQVVE
MNLAAVDLAVQSLVEIHYPDSWRDANDERGTDFRLNQQMPDYMRDMVFPILRQKGDDLPV
SSFAPDGVFPFSTARYEKRGVAINVPEWIKENCIQCNQCAYICPHATIRPFIASEQELAA
APATYETIPPNAKEFKGMGFRIQVYTLDCMGCGNCADICPAKVPALVMKPIDTQAAVQEE
NRTFAETLSPKGHLVKRATVIGSQFQQPLLEFSGACSGCGETPYARIVTQLFGERMMIAN
ATGCSSIWGASAPVSPYCANADGHGPAWNNSLFEDAAEFGFGYHMAVSQRRNLLADQVRR
AVHSLPEGELRGELSAWLDGMMDPELSRRHGDRLKELLPKAGDNEFLQQIAASADLFTKK
SIWIYGGDGWAYDIGFGGLDHVISTGEDVNLLVMDTELYSNTGGQCSKATQLGAIARFAA
SGKRTSKKDLGRMAMTYGYVYVASIAIGADKNQTLRAITEAEAYPGPSLIIAYSTCINQG
LRKGMGKSIEESQLAVKAGYWPLYRYNPLLKQEGKNPFILESKKPDGSLAEFLSGEVRFQ
ALEKQNPEVARQLREQMEREALERFRMFRDMADWQPSKGDVPKDGGRKHDHVPAAAGAAE
EPAPVCVSATSDPRYSRPGQPEEECDDGRAGIDKNIKE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaccaggaaaacgatggacggcaacacggcagcggcgcatgtcgcctatgcg
ctgagcgagacggcggccatctatccgatcaccccatcctcgaccatgggggaagtggcg
gacgagtgggcggcggagggacgcaagaacatcttcgggcaggtgctgaacataaaagag
ctgcagtcggaggcgggggcggcgggcgccgtgcacggctcgctggtcgcgggagcgctc
accaccaccttcaccgcgtcgcaggggcttttgctgatgctccccaacatgtacaagata
gcgggcgagcagctcccgggcgtgttccacgtctcggcacgcgccatcgccacccacgcc
ctctccatattcggcgaccaccaggacgtcatggccgcgcgccccaccggcttcgcgatg
ctctgctcctcctcggtccaggaggtgatggacctcgccctggtggcccacctggccgcc
ctggaggggagcctccccttcctgcacttcttcgacggcttccggacctcccacgaggtg
cagaagatcgaggtgatcgattaccaggacatggcccggctggttaaccacgacaagctg
gcggccttccgcagcaaggccatgaatcccgagcatccggaactgcgcggcacggcgcaa
aaccccgacatctacttccaggggcgggagcgcgccaaccccttctacgaggcgctgcct
cgggtggtcaccgattccatggaacgggtcggacagcttaccgggcggcactaccggctc
ttcgactacatcgggcacgcggaggcggaccgggtcatcgtcaccatgggctcttcctgc
gagacggccgaggaggtggtgcagtacctgaacagtcagggggagaaggtcggcctggtc
aaggtccggctgtatcgccccttcgattccaatgccctcctttccgtcatcccccccacg
gccgggaagatcaccgtgctggaccggaccaaggagcccggcgcccagggggacccgctc
taccaggacgtctgcaccgcgttcctcgagcgcggcggccaggtccccgagctttacgcg
ggacgctacgggctcggttccaaggaattccggccggtgcacgtgaagagcatcttcgac
aacatggacggccgccccggcaagcgccacttcaccgtcgggatcaccgacgacgtgagc
gacagctcgctcccggtcgagggaaccctctccaccaccccggaaggaaccatacagtgc
cgtttctgggggatgggcgccgacggcaccgtcggcgccaacaaggccgccatcaagatc
atcggcgacaacaccgacctctacgtgcaggcctatttctcctacgactcgaagaagtcc
ggggggatcaccgtctcgcacctgcgctttggcgagagcccgatccagtccacctacctg
gtcgacgccgccgatttcatctcctgccagaaggcgccctacgtgcagatctacgacctc
ctcgaggggatcaaggaagggggcaccttcctcctgaactccccctggaacagcgtcgag
gccatggagaagaacatcccggcaaccatgcgccgggccatcgcgcaaaagaaggtccgc
ctctacaacgtggacgccatcagcatcgcccagtccgcggggcttggtgggcgcatcaac
atgatcatgcagaccgccttcttcaagctctccggcgtgctccccttcgagcgggcggtg
gaactcctgaaggactccatacgcaaggagtacggcaggaagggagaccaggtggtggag
atgaacctcgccgccgtcgacctcgccgtgcagagcctggtggagatccactaccccgac
tcctggcgcgacgcgaatgacgagcgcggcaccgacttccgcctcaaccagcagatgccc
gactacatgcgggacatggtcttccccatcctgcgccagaagggggacgacctgccggtt
tcctccttcgcgcccgacggggtcttccccttctccaccgcgcgttacgaaaaaaggggc
gtcgccatcaacgtcccggagtggatcaaggaaaactgcatccagtgcaaccagtgcgcc
tacatctgcccgcacgccaccatccgcccgttcatcgcctcggaacaggagctggctgcc
gcgccggcgacgtatgagaccatcccccccaacgccaaggaattcaaggggatgggtttc
cgtatccaggtctacaccctggactgcatggggtgcggcaactgcgccgacatctgcccc
gccaaggtcccggcgctggtgatgaagccgatcgacacccaggccgcggtgcaggaggag
aaccgcacgttcgccgagacgctctcccccaagggacacctggtgaagcgggccacggtg
atcggcagccagttccagcagccgctcctcgagttctccggcgcctgctccggctgcggc
gagaccccctacgccaggatcgtcacgcagctcttcggggagcggatgatgatcgccaac
gccaccggctgcagctcgatctggggcgcctcggcgccggtctccccctactgtgccaac
gccgatgggcatggccccgcctggaacaactcgctcttcgaggacgccgccgagttcggc
ttcggctaccatatggccgtgtcgcagcgcaggaaccttctggccgaccaggtgcgccgc
gcggtgcacagcctgccggaaggggaactaaggggagagctctccgcctggctggacggg
atgatggacccggaactctcccggcgccacggcgaccggctgaaggagctgctccccaag
gcgggggacaacgagttcctgcaacagatcgccgcctcggcggacctcttcaccaagaag
tccatctggatctacggcggcgacggctgggcctacgacatcggcttcggcgggctcgac
cacgtcatctccaccggcgaggacgtgaacctcctggtgatggacaccgagctctactcc
aacaccggcggccagtgttccaaggcgacccagctcggggccatcgcccgcttcgccgcc
tccggcaagcggacttccaagaaagatctcgggcgcatggccatgacctacggctacgtc
tacgtcgcctccatagccataggcgccgacaagaaccagacgctacgcgccatcacggaa
gccgaggcgtaccccggcccgtcgctcatcatcgcctactccacctgcatcaaccagggg
ctcaggaaggggatggggaaatcgatcgaggagagccagctcgccgtgaaggcgggttac
tggccgctgtaccgctacaaccctcttttgaagcaggaagggaaaaaccccttcatcctg
gagtcgaagaaacccgacggttcgctcgccgagttcctttccggggaggtgcgcttccag
gcgctcgaaaagcagaaccctgaggtggcccggcagcttcgcgagcagatggagcgggag
gcgctggagcgtttccggatgttccgggacatggcggattggcagccaagcaagggggac
gtacccaaggacggggggagaaagcacgaccacgtccccgccgccgcgggagcggcggag
gagcctgcgccggtctgcgtcagcgcgaccagcgacccgcgctacagccgccccgggcag
cccgaggaggaatgcgacgacggccgcgccgggatcgacaagaacatcaaggagtaa
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