Gloeophyllum trabeum: GLOTRDRAFT_116683
Help
Entry
GLOTRDRAFT_116683 CDS
T03130
Name
(RefSeq) transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03022
Basal transcription factors
gtr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLOTRDRAFT_116683
09124 Replication and repair
03420 Nucleotide excision repair
GLOTRDRAFT_116683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_116683
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_116683
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GLOTRDRAFT_116683
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GLOTRDRAFT_116683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
19300222
NCBI-ProteinID:
XP_007867333
JGI:
Glotr1_1_116683
UniProt:
S7Q1U0
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MSKFNKDGANGSVIDDLPHALLPFLQSQSQNTLTRLYQRPSACLSIFRLLPPLDRQIVMN
LLWLESPVPAVTMSAWVTREGKKIYDATLLNLSRLHILPNPSVRLSLNGTFKTSLRQAIT
GGGTIGSFGTAAPKDDKHQPATVETLDAYAVERWETILHYMVSSGTGQLPTKPSPGVLFL
LQRSGLMSTVHGSALQITSAGFQFLLHSPHDQLWQLLLQYLYMAEEREMDLVEILSFLFM
LSTMELGREYSVESLSGTQKAMLEDLRDYGLIWQRRASSRRFSPTRLATTLTSSLPPLPT
STSSGAGTQDQGFVILETNYRLYAYTDNPLQTAVLNLFVTLKYRFPNLVVGSITRDSVRK
ALANGITADQIISYLSTHAHPQMRKNKPLIPVTVQDQIRLWELERNRLKSEEGYLYTAFA
SQADYEYVLNYAKELNVVVWESPAKRCFFGTLEGHSNIRGFIERRTGGQA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattcaataaagatggtgcaaatggctctgtcattgatgatctaccgcacgcg
ttattgcctttcctacaatctcagtcgcagaacacgctaacgcgtttgtaccaacgcccc
tcggcttgtttgtcgatatttcgtcttctaccgcccttggataggcagattgttatgaat
ctgctatggctggagtcaccagtcccagcggtcactatgtcggcctgggtaactcgcgaa
ggaaaaaagatatacgacgcaacactgctgaacctttcacgacttcacatcttgccgaac
ccttcggtgagactttccttgaacggcactttcaaaacgagcctacgacaagctataaca
ggaggcggcaccattggaagctttgggaccgcagcaccgaaagacgacaagcatcagcct
gctaccgtcgagacactggacgcatatgctgtcgagcgatgggagaccatactccactat
atggtctcttccgggacaggtcaattaccaacgaaaccctccccaggagtgttattctta
ctacagcgtagcggcctcatgtctacggttcatgggtccgctctccagattacatctgca
gggttccagttcctcctccattcaccgcatgatcagctctggcaactattacttcaatat
ctctatatggcggaggagagggagatggatctagttgagatccttagcttcttatttatg
ctctccacgatggaactcggaagggaatattccgtcgagagtttaagtggcacccagaag
gccatgctggaagatcttcgggactacgggctgatctggcaaagacgggcttcgtcccgc
cggttcagcccaactcgtctagctacaacgctgacatcatcgttacctcccttgccgact
tccacaagctccggcgctggcacacaggatcagggcttcgtaatactcgagactaattat
cgactctatgcgtacaccgataatccactacaaactgccgtattgaatctattcgtcacc
ttgaagtatcgtttcccgaatctggtggttggatctataacccgtgatagcgtacggaag
gcgctggcaaacgggattactgcagatcagatcatcagttatctgagcacccacgcgcac
ccacagatgcgtaaaaataaacctctaatcccagtcaccgtgcaagaccagattcgtctg
tgggagttggaaaggaacagactcaaatcggaagaaggttacctgtacaccgctttcgct
tcccaggcggactacgagtacgtcctcaattatgccaaagaactcaacgtcgtggtctgg
gaaagtcctgccaagcgatgcttcttcgggacattggaggggcacagcaatatccgaggc
tttatcgagcgacggaccggtggacaagcttag
DBGET
integrated database retrieval system
