Gloeophyllum trabeum: GLOTRDRAFT_137408
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Entry
GLOTRDRAFT_137408 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_137408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_137408
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_137408
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_137408
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
GLOTRDRAFT_137408
Spliceosome [BR:
gtr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
GLOTRDRAFT_137408
Complex B
GLOTRDRAFT_137408
Complex C
U2 SnRNP specific factors
GLOTRDRAFT_137408
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
GLOTRDRAFT_137408
TFTC complex
GLOTRDRAFT_137408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
19303751
NCBI-ProteinID:
XP_007864130
JGI:
Glotr1_1_137408
UniProt:
S7RQV5
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MHLYNLTLQPPTAITQAIVGNFSGARQQEIIVSHGTRLELLRPDPQTGKVATVIACDVFG
SIRSLAAFRLTGGTKDYAIVGSDSGRIVILDYDPKTSSFVKLHQETYGKSGARRIVPGQY
LAVDPKGRSVMISAIEKAKLVYILNRDAAANLTISSPLEAHKNASIIHHIVGLDVGFENP
TFAALEVDYSESDQDPTGEAFNNAEKLLTYYELDLGLNHVVRKWSAPTDPRANLLVQVPG
GQLASSDRYDGPSGVLVCCEDHIIYRHMDAPQHRVPIPRRRHPLEDPDRGLIIVAAVMHK
MKGAFFFLLQSEEGDLYKVTIEHEEEEVKALKIKYFDTVPVASSLCILKSGFLFVASEFG
NHYLYQFQKLGDDDDEPEFSSTSYPSFGMDDPTLPLRRAYFKPHALDNLALADELESLDP
ILDAKVMNLLPNSDSPQIFTACGRGARSSLRMLRHGLEVEEVVSSDLPGIPNAVWTTKIK
EDDLYDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGEDALLQVHPHGIR
HVLSDRRVNEWRAPSGKTIVTATTNKRQVVVALSSAELVYFELDLEGQLNEFQDRKAMGS
TVLALSVGEVPEGRQRTPYLAVGCEDQTVRIISLDPESTLETISLQALTAPPSAICIADI
LDASINKSHPTTFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRLLRIQTQKNPA
ILALSSRSWLNYTHQNLMHFTPLILDTLDYAWNFSAELCPEGLIGIAGSTLRIFQIPKLG
TKLKQDSIPLAYTPRKFISHPTNRYFYLIEGDHRSYSDATATSKLNELRSQGKMIDDDIV
NLPPETFGRVKAPAGQWASNIRIIDPVDAKTVNVIPLDNNESAFSLAIVPFAARGGELHL
VVGTAQDTFLSPRSCTSGFLRTYRFTDDGTGLELLHKTETDDVPLAVMPFQGRLVAGVGK
ALRIYDIGKKKLLRKVENKGFGSAIVNLNTQGSRILVGDMQESIFFAVYKAPENRLLIFA
DDTQPRWVTAACMVDYTTVAAGDRFGNVFVNRLDMKVSDQVDDDPTGAGILHEKGILMGA
PHKTKMLSHFHVGDLVTSIHKVSLVAGGREVLLYTGLHGTVGILVPFVSKEDVDFISTLE
QHIRSEQPSLVGRDQLAWRGYYVPVKAVVDGDLCETFARLPASKQSAIAGELDRTVGEVL
KKLEQLRVTASGF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttataatctcaccttgcaaccgccaacagccatcactcaggccatcgttgga
aatttctccggcgcgaggcagcaggaaatcattgtttcgcatggaacgcgactggagctg
ttgcgacctgacccccagactgggaaggttgccactgtgatagcatgcgacgtctttggt
tcgatacgctcactggctgcgttccgcctgactgggggtaccaaggattatgctatagta
ggatctgattctggacgcattgtcattctggattatgatcccaaaactagtagcttcgtg
aaactgcatcaggagacttatggcaagtcgggcgcgcgccgtatcgtccctggccagtac
ttggcggtcgaccccaaaggccggagcgtcatgatctcggccatagagaaagccaaattg
gtctacatcctgaacagagatgccgctgcgaacctgacgatatcgtctcctttggaggcc
cataaaaatgcctctataatccatcatattgtgggattggacgtcggattcgagaaccct
acctttgcggcgctcgaggttgactacagcgagtccgaccaagatcctacaggcgaagcc
ttcaataacgccgagaagctactcacctactatgagcttgatcttgggttgaaccatgtt
gtgcgaaaatggagtgcaccgacagatcctagagcgaatctcctcgtccaagttcctggt
ggccaactcgcgtctagtgaccggtacgacgggccctccggtgttttagtctgttgcgaa
gatcacattatttatcggcatatggacgcccctcaacaccgagtgcctatccctcgtaga
cggcatcccttggaggatcccgaccgcggcctcattattgtggctgctgtcatgcacaaa
atgaagggcgctttctttttcctgcttcagagtgaagagggtgacctttacaaggtcacg
attgagcacgaagaggaagaggtgaaggcactgaaaattaagtatttcgacactgtacct
gttgcatccagtctctgtattctcaagtccggttttctcttcgtcgcttctgaattcggt
aaccactatctttatcaattccaaaagctcggtgatgatgatgacgagcccgaattcagc
tcgacctcctacccctccttcggcatggatgatcctaccctgcctctccgccgggcatac
ttcaagccacatgctctggataacttggccttggctgacgagctcgagtctctggacccg
attctcgacgcgaaggtgatgaacctgttgccgaactcagatagcccccagattttcacc
gcgtgcgggagaggtgctcggagctcgctcaggatgctgcgacacggtctcgaagttgag
gaagttgtcagctcggacctccctggtattcccaatgcggtgtggacgactaagatcaaa
gaagatgatttatatgattcatacatcatcttgtctttcgtcaatggtacccttgttctc
tcaataggcgaaaccatcgaagaagtgcaagataccggattcctttcttctgcgccgaca
ttggccgtccaacaaattggagaagatgctctgcttcaagtccatcctcacggtatccga
catgtgctttctgatcgacgggtgaacgagtggcgtgcgcccagtggcaaaacgatcgtt
acagctactacaaataagcgacaagttgtggtggcgttgagctcggcagagctggtctac
tttgagcttgacttggaaggccagctcaacgagttccaggatcgtaaagcaatgggcagt
acggtcctcgcactcagtgtcggagaggtgccggaaggtcgtcaacgaacaccctacctg
gctgttggctgtgaggatcagactgtccggataatctccctcgacccggagagcacgcta
gagaccatcagtctacaagcgctgacggccccgccatctgcgatatgtatcgcggatatc
ctcgacgcgagcataaacaagtcgcatccgacaacgttcgtcaatatcggtctgcagaat
ggtgtgctgcttcgtacggtactggatcctgtcaacggccaactcacggacacacggaca
cggttcttgggtacacgaccaatccgactgttgcggattcagacgcagaagaatcccgct
atcctggcgctctcctcacgatcgtggctgaattatacccatcagaacctcatgcacttc
acgccgctcatcctcgatacgctggattatgcatggaatttctccgcggagctgtgccct
gaagggttgatcggtattgctggaagcacattacgaatattccagataccaaagctcggg
acgaagttaaaacaggactccatcccactggcatatactcctcgcaagttcatctcgcac
cctacgaatcggtacttctaccttatcgaaggcgaccatcggtcctactcggacgcgacg
gccacgagtaagctgaatgaattgcggagtcagggaaaaatgatcgatgatgacatcgtc
aatctgccacctgagacgtttggacgcgttaaagcccctgcggggcagtgggcgtcgaac
atcaggattatcgatccggttgatgcaaagacagtaaatgtgataccgcttgataacaat
gagtcggcgttctcgctcgctatcgtgcccttcgcggctcggggaggagagctgcatctg
gtggttgggactgcgcaggacacgttcttgtcgccacggtcgtgtaccagtggtttcttg
cgcacataccggtttacagatgatggcaccgggcttgagttattgcacaagaccgagacg
gacgacgtcccgttggctgtgatgccgttccagggcaggctggtggcaggtgtgggcaaa
gctctacgtatttatgatatcggcaagaagaagcttctacggaaagtggagaataaaggc
ttcggctccgcgattgtgaatttgaatacacaaggctcccgcatcttggtcggtgacatg
caagagtctatcttctttgcagtatacaaagcacccgagaacagactcctcatcttcgct
gacgacacgcagcccagatgggtcacggcggcgtgcatggtcgattatacgaccgttgct
gccggcgacagattcggaaacgtcttcgtgaaccgcctagacatgaaggtgtcggaccag
gttgacgacgatcccaccggcgctggcattttgcacgagaagggtatactaatgggtgcg
ccgcacaaaacgaagatgctgtcccacttccacgtcggtgaccttgtaacgtcgatacac
aaggtgtcgctggttgctggaggtcgtgaagtcctgctctataccggtctccacgggacg
gtcggcattctcgtgcccttcgtgtcgaaggaggacgtggactttatctcgacgctggag
cagcatatacggtctgagcagccgagtctggtcgggcgagaccaactggcgtggagaggg
tattacgtgccggtgaaggcggtcgtggatggggatctgtgcgagacgtttgcgaggttg
cccgcgagcaagcagagcgcgattgcgggcgagctggataggacggttggggaggtgctg
aagaagctggagcagctgagggtcacggcgagtgggttctag
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integrated database retrieval system
