Guillardia theta: GUITHDRAFT_139251
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Entry
GUITHDRAFT_139251 CDS
T02925
Symbol
TFIIH
Name
(RefSeq) SSL1 transcription factor & nucleotide excision repair
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gtt
Guillardia theta
Pathway
gtt03022
Basal transcription factors
gtt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GUITHDRAFT_139251 (TFIIH)
09124 Replication and repair
03420 Nucleotide excision repair
GUITHDRAFT_139251 (TFIIH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_139251 (TFIIH)
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_139251 (TFIIH)
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GUITHDRAFT_139251 (TFIIH)
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GUITHDRAFT_139251 (TFIIH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
zinc-ribbons_6
DUF1263
Motif
Other DBs
NCBI-GeneID:
17301761
NCBI-ProteinID:
XP_005831940
JGI:
Guith1_139251
UniProt:
L1JA45
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MNQRDMRPTRLGVVQQVVGSFLDNFFDQNPISQVSLVELRGGKAEKLTELSGNSRHHKNK
LEERLAAHRSAGAGMPSMRAGVVWDKRSSYDVRIFELMRPGGHLSDYRLKSAGVKVNIVG
MAAELYVARAVSKRTGGSYSVATHAVQVRDMVLKHTSPSPVEEGEGGKEKPAAGMWVGFP
RKSYGALGGWQCPRCMDVVKEIPADCGLCGLKLLSSSHLARSYHHLFPVQSFHELEDEEG
PATSTSTCGGCGVLLGKESKHVFCGLCDGFIHEMLHVCPGCEGREAEAS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagagggacatgcggccaacgcggctgggggtggtgcagcaggttgtcggcagc
tttctggacaacttctttgatcagaacccgatttctcaagtctctctcgtcgagctgcgt
ggagggaaggcagagaagctaacagagctctcgggtaacagcagacatcataagaataag
ttggaggagcgccttgctgcgcataggagtgctggcgcgggcatgccctccatgcgtgca
ggcgtcgtatgggacaagagaagttcttatgatgtacggatctttgagctcatgcgaccg
gggggacatctttcagactatcgtttgaagtcagcaggagttaaagtgaatattgttggt
atggccgctgagttgtacgtggcgagggcagtcagcaagaggacgggaggaagctacagt
gtggcgacccatgcggttcaggtcagggacatggttctcaagcatacgtcgccgtcgccg
gtggaggaaggagagggcgggaaggagaagccagcggcaggcatgtgggttggttttcct
cgaaagagctacggagctctagggggatggcagtgtcctcgctgcatggatgtggtgaag
gagattccagcagactgcggcctatgcggcctgaagctcctttcctcctcccacttggcc
cgaagctatcaccatctctttcccgtccagtccttccatgagctcgaggacgaggagggc
ccggccacatcgacctcgacatgcggcgggtgtggcgtgctgctcggcaaggagtcgaag
catgtgttctgcggcctctgcgacgggttcattcacgagatgctacatgtctgcccgggg
tgcgagggcagagaagcagaggcgagctga
DBGET
integrated database retrieval system
