Geotalea uraniireducens: Gura_4047
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Entry
Gura_4047 CDS
T00521
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
gur
Geotalea uraniireducens
Pathway
gur02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Gura_4047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gur03021
]
Gura_4047
Transcription machinery [BR:
gur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Gura_4047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Serine_rich
Ribonuc_2-5A
Motif
Other DBs
NCBI-ProteinID:
ABQ28191
UniProt:
A5G8S3
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Position
complement(4706383..4708143)
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AA seq
586 aa
AA seq
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MAKKNMDEVKQLIDLGKEKGFLTYEEVNDLLPPDIVSSEQIDDVMSMFGDMDIEIVDSAQ
KVKIPKVKLDLEDEEELEGEQEEVEFEPGTLGRTSDPVRMYLREMGSVSLLTREGEVEIA
KRIEVGERDVASVILNTPITVKEVISLGDKLRKLQIAAIEISKEVEEEELEEGEEDVQAT
RLLTVIDEIRADDTRMEELHAALEQETVTKSERENILAEQQELKAKMADLLKSLRLKDRH
IEKISQRLKELSWKVDKVMQEIADLEKEAGVAPADLMPMLDKMHKGADEEKKVLKKLGIS
LEEAQKLEKRFRNAEKKLKKIEQESGFQATELSTALLAIEEGERKAKLAKSELVEANLRL
VVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQ
ARTIRIPVHMIETINKLIRTSRQLVQEIGREPSPEEIAERMSLPLDKVRKVLKIAKEPIS
LETPIGEEEDSHLGDFIEDKGVVSPLEAVIKANLSEQTSRVLSTLTPREEKVLRMRFGIG
EKSDHTLEEVGQDFEVTRERIRQIEAKALRKLRHPSRAKKLKSFVE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaaaatatggatgaagtaaaacaactgattgatctgggtaaggaaaaagga
tttcttacctatgaggaggtcaacgatctcctccccccggacattgtttcttccgagcag
attgacgacgtcatgagtatgttcggggacatggatatcgaaatagtcgattccgcgcaa
aaggttaagattcccaaggtcaagcttgaccttgaagatgaagaggaactggaaggcgaa
caggaagaggtggagtttgagccggggacgctcggacggaccagcgaccctgtccggatg
tacctgcgggaaatgggttccgtttcccttctgacccgtgaaggcgaggtggaaatagcc
aagaggatcgaggtcggcgagagggatgtggcgagtgttatcctcaacaccccgatcacg
gtcaaagaagtgatctcgcttggggataagctgcgcaagttgcagattgcggccatagag
ataagcaaagaggtcgaagaggaagagctcgaggaaggtgaggaagatgtccaggcgacc
aggctcctgaccgtaatcgatgagattcgtgccgatgacacgcgcatggaagagcttcat
gccgcccttgagcaggagacagtaaccaaaagcgagcgggaaaatattttggcggaacag
caggaattgaaggcgaaaatggccgatcttctgaaatccctccgcctcaaggaccgccat
attgagaagatatcccagcggctgaaggagctttcctggaaggtggacaaggtgatgcag
gagatcgccgacctggagaaggaagccggtgttgcccctgctgatctgatgcctatgctg
gacaagatgcataaaggtgcggatgaggagaagaaggtcttaaagaaactcgggatttct
ctggaagaagcgcagaagctggagaaaagattcaggaacgccgagaaaaagctgaaaaag
atagagcaggagtccggcttccaggcgaccgagctttccaccgccctgctggccattgaa
gagggcgaaaggaaggccaagctggccaagtcggaactggtggaggccaacctccgtctc
gtagtttccatcgccaagaagtacacaaaccgtggcctgcagtttctcgatctgatccag
gaagggaatatcggcctgatgaaggcggtggacaagttcgagtaccagcgcggctacaaa
ttctcgacctacgccacctggtggatccggcaggccattacccgcgccattgccgaccag
gcccgcaccattcgcattccggtccacatgatcgagaccatcaacaaactgatccgcacc
agccgccagctggtccaggagattggccgcgagccgtcgccggaggagattgccgaacgg
atgagcctgccgctggacaaggtgcgcaaggtcctcaagatcgccaaggagccgatctcc
ctggagacacccatcggcgaggaagaagattcccacctgggggacttcatcgaggacaag
ggggttgtttctcccctggaggcggtcatcaaggccaacctttccgaacagacctcgcgg
gtgctgtccaccctcaccccgcgcgaagaaaaggtgctgcggatgcgtttcggcatcggt
gagaagagcgaccataccctggaggaggtcggtcaggatttcgaggtgacccgtgagcgt
atccggcagatagaggccaaggcgctgcggaagctccgccatccgagccgggcaaagaaa
ctcaagagcttcgtggaatag
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