Gardnerella vaginalis 409-05: HMPREF0424_0005
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Entry
HMPREF0424_0005 CDS
T01146
Name
(GenBank) LPXTG-motif cell wall anchor domain protein
Organism
gva
Gardnerella vaginalis 409-05
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Gene cluster
GFIT
Motif
Pfam:
Rib
Lipase_3
Hydrolase_4
Mbeg1-like
LIDHydrolase
DUF900
Abhydrolase_5
Abhydrolase_1
Abhydrolase_6
TSP3_bac
Abhydrolase_3
PGAP1
Peptidase_S9
Thioesterase
Motif
Other DBs
NCBI-ProteinID:
ADB13472
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Position
5200..7962
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AA seq
920 aa
AA seq
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MRKVSTVHTISGIVLTFGLIISSLVYIPSLATTAAAEETSPVHVPLTAQTAHDISTGRIR
LENNQIDSLLYHKAALDPDQDSDGDGLKNSEELYTYVKNGRTYYGYNSHPLIKDTDGDGL
DDKNDSNPRRWDISPRDMALFMELVYREDSYVKEVLDYSKPLRIIYENRNEYRLMHNELA
PFWKVKETYHFGSGFDAILFENVNPAYPFIKQNGVQVLAIRGTKGATDVWNDVLLGTGSN
PGQAADIDKLIDEYKQKNTVSNLYVTGHSLGGYLAQRALIRAKSSGATFNIKAYTFNAPR
IKGNIFNRWLWETSDFGDKLTKEGYAVHYKVDNDTVIGGIGNFEGAISVGSSGAGHGSRS
YFEPRMNAFQGFTVGERNKIEGTGRKIDALDGLVNEPVIKTDEQAFEPKITNIDIMENDP
LPKGTTIKHLLNPNDIPQGSTITDITEYDKIDTSQCGNYEGKILLVLSGRILKTIIVPIT
IHKRLANIEELPNVTAEPGKKIEVKKDNKIPDNFDFKPYLKNLPENSTVQVVKQPNTTNT
GETTFIIEITFANKAKQKVTLKAHVVEIIPATPLNPAKKSITWAELIPAKKSTPWIELTP
ATPAPTPTPVPPTPVPPTPEPTPSPSPTPTPTPDQQPAVPLQPKPNPVNPTPVPPKPAPK
PESQPVPPTPESHSDNSEHSSNGEPDKSANSTTPQTNKFDQDHKEIPSMGFPEPTHPSKT
LQTPAVSNDSMRENHIELNANSESHTLQQQIPSAPKSIADLLPALCNTLTVGNNNIAYAG
KNNHITVTVNATSEFMRRLQLEKAVKAYAYIYSNPKLLYSANGMKYVTVHINEYGRIVFD
VVIPEEYKGNHTIVLIDENGKQVAWTNTLVKKDPHLHKQSTIANNALPRTGIQIIPIVLS
VALMLFVSTIVTIARKRKFN
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtaagtaccgttcacacaattagtggaattgtattaacttttggtttgatc
atttcatcgctggtttacataccttcgctagcaacaaccgcagcggcagaagaaacatca
ccagtgcacgtacctcttaccgcacaaaccgctcacgacatttctactggtcgaattcgt
ttggaaaataatcagattgattctttgctttaccataaagccgcgctagatccagatcaa
gatagcgacggcgacggtctgaagaacagcgaagagctttacacttacgtaaaaaacgga
cgcacatattacggatataattcgcatccacttattaaggacaccgacggcgacggatta
gatgacaaaaacgatagcaatcctcgcaggtgggatattagccctcgcgatatggcgctt
tttatggagcttgtgtatagggaagacagctacgtcaaagaagtacttgactactcaaaa
ccgctcaggattatttatgaaaatcgcaatgagtaccgccttatgcacaacgagcttgca
ccattctggaaagttaaggaaacctaccacttcgggagtgggtttgacgctatccttttt
gaaaatgtgaatcctgcgtacccatttattaagcaaaacggcgtgcaagtattagcaatt
cgcggcactaaaggcgcaacagatgtatggaatgatgtcttgcttggaactggctcaaac
ccaggccaagctgctgatatagataaattaattgatgaatataaacaaaagaacactgta
agcaatttatatgttacaggtcactctttaggtgggtacttagcacaaagagccttaatt
cgagctaaaagtagtggcgcaacttttaatattaaagcttatacttttaacgctccgaga
atcaaaggtaatatattcaacagatggctttgggaaacatctgattttggcgataaacta
actaaagaaggttatgccgttcattataaagttgataacgatacagtaataggcggaata
ggaaatttcgaaggtgcaataagcgtaggaagttctggagccggtcatggatccagaagc
tactttgagcctagaatgaatgctttccaaggattcacagttggcgaacgcaataaaatt
gagggaaccggtcgcaaaattgatgcactcgacggattagttaacgaaccagttattaaa
actgacgaacaagctttcgaacctaaaattacgaatattgacattatggaaaatgatcca
ttgccaaaaggcacaacaataaagcatcttcttaatcctaacgatataccgcaaggctct
accattacagacattacagaatacgacaaaattgacacttctcaatgcggcaactacgaa
gggaaaatactactcgtactatctggtagaatattaaaaactattatagttccaataacc
attcataaacgattggctaatatcgaggaacttccaaatgttactgctgaacctggcaag
aaaatagaagtcaaaaaagacaataaaatccccgataatttcgacttcaaaccatactta
aaaaacttaccagaaaacagcacagtacaagttgtaaaacaaccaaacacaacaaacact
ggagaaacaacatttatcatagaaataacctttgcaaacaaagcaaaacagaaagtaact
cttaaagctcacgttgtagaaatcattccagcaacaccactaaacccagctaaaaagagt
attacgtgggccgagttaattcctgcaaagaaatcaacaccatggatcgagctaacacca
gcgacaccagctccaacaccaactcccgtacctccgacacctgttccaccgacaccggaa
ccaacgccttcgccttcgcctacgccgacaccgacgcctgatcaacaacctgcagtgcct
ctgcagccgaaaccaaacccggtgaatccaacacccgttccgccaaaacctgcgcctaaa
ccagagtcacaacctgttccaccaacaccagaatctcattctgacaacagtgaacactct
agcaatggcgaacctgataagtctgcaaatagcacaaccccacagactaataagttcgat
caagaccataaggaaattccaagcatgggatttcccgaaccaacacatccttccaaaact
ctacaaactcctgcagttagtaacgattctatgcgcgaaaaccacatagagcttaacgca
aactcagaatcacacacattacagcaacagattccatcagcaccaaagagtattgcagat
ttacttccagcgttgtgcaacactctcaccgtcgggaataataacattgcttatgcggga
aaaaataaccatatcactgttacagtaaatgcaacatcagaattcatgcgcagattacaa
ctagaaaaagcagtaaaagcttatgcctacatatattccaaccctaaacttctttatagc
gcaaatggaatgaaatatgtaacagttcacattaatgaatatggcagaattgtattcgac
gtagttatcccagaagaatataaaggcaatcatacgattgtccttattgacgaaaacggt
aaacaagttgcgtggacgaatactttagtaaagaaagaccctcatttacacaaacaatcc
acaatagccaataatgcactccctcgtactggaatacaaataattccaattgtacttagc
gttgcattaatgctgtttgttagcacaattgtgacaattgcaagaaaaagaaagtttaac
taa
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