Gardnerella vaginalis ATCC 14019: HMPREF0421_20899
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Entry
HMPREF0421_20899 CDS
T01344
Name
(GenBank) glycosyl hydrolase family 20, catalytic domain protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glyco_hydro_20b
CNF1
Motif
Other DBs
NCBI-ProteinID:
ADP38981
UniProt:
E3DA87
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Position
1101059..1103002
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AA seq
647 aa
AA seq
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MKIDNSNIEIIPSPQNISIYAKDTITLPQSSHISFINIKPDLRITTAAKQLCEDLKNNHN
CNWSISYSEGYKSAISAAINKHLRIQEYKISSKISTNQTLVNIEAGSIASICFAIQTIRQ
LIMQYGLILPSLQIQDFPEIPVRAYSYDVSRGRVPKLSWLKTLVDQLSLYKYNQLQLYVE
HVIDLDDTIESWIGHSPLTCSEIIDLDEYCYARGIELVPTLATFGHMYEILRSNSYKQLG
EFPEQSERPFSFVERMMHHTLNPTNPNTIPFISKRIKDYASLFKSNKFNIGADETFDLGC
GESKNVAEKIGVANLYLSYIKKLCEKLHELGLQPIMYADIAIKHPELLADIPKNVIFANW
DYSANMNENNIKLIKSQNRDQYVCPGTQSWNRLIPDFDSAINNISKTCEYGHKNHVLGFL
LTDWGDYGHINDPILSLPYVIISSEYAWKSNNIAKKDLINKVSNVFANRTNSNLLNIIKQ
ASHAQAFSWSDAVQFKELEYNNENIANEDVLFSLGYPKNTSLEQARRRFLNERESQILNA
KEYNRTLSECSKSIYDINACSENINCENINKDFISTSILNIQGQQLLNQLGLYILNQRFT
LAEAKSFKTNLNEWFTQYQNRWESIGKTADLYRIREVLDWYIKILGM
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgacaattcaaatatcgaaataataccttcaccacaaaacatatcaatatac
gcaaaagatactattacgcttccacaatcaagtcatattagtttcataaatattaaacca
gacttaagaataactacagcagcaaaacagctatgtgaagatttgaaaaacaatcacaat
tgcaactggagcattagctactcagaaggatataaaagcgctatatcggcagctattaac
aaacatctacgtattcaagaatataaaatttcatctaaaatctcaaccaatcaaacactt
gtaaatatagaagctgggagcatagcgagtatctgctttgcaatacaaactataagacaa
ctaattatgcaatatggtctaatactgccatcattacaaattcaagactttccagaaata
cctgtaagagcatattcttatgatgtttcaagaggaagagtgccaaaactttcatggtta
aaaactttagtagaccagttaagtctatacaaatataatcaacttcaactatacgtagaa
catgttatcgatttagatgacacaattgaatcctggattggacattcaccattaacttgt
agtgagattatcgatctagatgaatactgctatgcaagaggaatagaactcgttccaaca
cttgcaacttttggacacatgtatgaaatactaagaagtaactcatataaacagcttggc
gaattcccagaacaatcagaaagacccttcagttttgttgaaagaatgatgcatcatact
ctaaatcctactaatcctaacactataccgtttatatctaaaaggattaaagattatgca
tcactatttaaatctaataagtttaatattggcgccgatgagacctttgaccttggatgc
ggtgaaagtaaaaatgttgctgaaaaaataggagtggcaaatctttatttgtcctatatt
aaaaagctatgtgaaaaattacacgaattaggtttgcagccaataatgtatgctgatatt
gcaataaaacacccagagttattagctgatattccaaaaaatgttatttttgcaaattgg
gattactcggcaaacatgaatgaaaacaatataaaactaataaaaagtcagaatcgcgat
caatacgtatgccctggcacacaatcttggaataggcttataccagattttgactctgct
ataaataacatatccaaaacatgtgaatatgggcacaaaaatcatgtattaggatttttg
ttaactgattggggagattatggacatataaacgatcccatactctcacttccgtatgta
ataatatcatcggaatatgcttggaaatctaataatattgcaaaaaaagatttaataaac
aaggtaagtaatgtatttgctaacagaacaaactcaaacttacttaacattattaaacaa
gcgtctcatgcacaagcattcagctggtctgacgctgtgcaattcaaagaacttgaatac
aataacgaaaatatagcaaacgaagatgtactattttcattaggatatccaaagaacact
tccctagaacaagcaagaagacgattcttaaatgaaagagaatcacaaatattaaatgct
aaagaatataatcgcactctatcagaatgctcaaagagcatctacgatataaatgcttgc
agcgaaaatataaactgtgaaaatataaacaaagattttataagcactagcattttaaac
attcaaggtcaacaactgctcaaccaattagggttgtacatactaaaccagagatttact
ctagctgaagcaaaatcttttaaaacaaatttgaacgaatggttcacacaatatcaaaat
cgttgggaatcaataggtaaaacggcagacctgtacaggatacgagaagtattggattgg
tatataaaaatactagggatgtga
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