Gardnerella vaginalis ATCC 14019: HMPREF0421_21226
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Entry
HMPREF0421_21226 CDS
T01344
Name
(GenBank) LPXTG-motif cell wall anchor domain protein
KO
K20276
large repetitive protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0421_21226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib
RibLong
GspA_SrpA_N
Big_6
bMG3
PUA_3
CarboxypepD_reg
DUF4625
Bact_surface_Ig-like
bMG6
B1
CMD
Motif
Other DBs
NCBI-ProteinID:
ADP39308
UniProt:
E3D7L6
LinkDB
All DBs
Position
1497100..1506294
Genome browser
AA seq
3064 aa
AA seq
DB search
MANSNRKKHAREQVESSFKNVDSSSAYATMRKVSLSTLATVLTAATCLGGQPILASSNIL
LPPTTAAFAQEVRNADPTPWLHTPNILEFQRYRFANSNGKIGQIGSDGLGDYDNTTKKSD
MYAHLEKNGNDQYLIFDVFFNNDGKDMTGASKQQQYVWQIPFAVADLNNGYYNVDTLSDL
SFNFYKRNGTSPQTTNAVLSRDFSLFTKENSQSATLSKPLQDDQHLGNSIYKITLGIRGG
NSNKQDLSDTFHKNAGDGVISNATTLTGVYKGKSYGIGLRTTNVDYAVHMHCKVKLRQGV
TLDDIQDAYTWANTSTYGRTTNSAYTFISGRERWKEPNLKRTKSDNLPPKLYFNGKEISD
SNNSITVYQGDTPTIKFGTSDDSGKVNSFSVKGLPNGNGDVTENSNGMEATEAKHHNHVV
NRVKFEYKNGNTPANTDYTVTVSATDASGNKVEKKVTVHLKNLNQKYKAPTTTPITVDWG
HKATNEELKKHVSNIEGGGQLDFNTFPETKLPDIAFNGKDTATISTSAKVIYSDNSYHIV
TIPVIVRKPLALQHKSELKDHEVKVNVGDTLTKTGNKVDAKQYLGITDKNVKDKIKSAEW
VNGEPSTNVAGKKTYTAKVTFSDGSTAEEKVTFTVRPQKPKIETDLTGVAGVKGKEVVVN
AGPGTAGSTVTLKDSKGNQIGTGKVGNDGKVTITVANGIPEGNITAVTTTADSVSSDASD
AKKATKDDKAPTLTADKDSVTVKVGEDLKIQLTAKDDVKIESIDTATATMAFARNDFSKM
MAVAARAKTDYTKNSDKEKVFTYNFSGFKPEEVGTYTLTFSATDAAGHKTEKTVTVKVEK
KEDIKSKNIAVDLGHKLTEKDAEKAIANGRKLKKAGATFKWSTETGGTPDTSTVGKEKTG
KVIVTIPTNDKNHPRVETVDVKVTVRDNESPKVAIQQKGDGGTYNTIDPGYPDGPKYPPV
FTITTYRGDKNDIKITATDNSGNVTTLTLTPKTPGETEKAPTGTGTTTDPKTLTLDGTTP
LNTKPGEYTRTLKAVDPSGNLNEVTVKFIVKPQSDKYGDVKGTPVTYNMGSGTKHPDPKS
GINADDLKKLPSDATYSWAKEPDWNKPGEQKDAKVRITFKDGSTKDVTTTVTVKDDIAPV
INTPSTNKAKRADTEKTAEYYQFKVHNGKPFSIDINAYDNSGKIKSATIATFPGHDGKIT
IDNQNGNSAEKPATIHIKGTAKRDASITNSSDNKWSRELVVTDEAGNESKLKVQISVYTD
AEEHTATAKQVDNPKDNNAITNAITITKYDNPNTPIDKTGITFEVGKIPTDDGNYTVPVT
VKYPDGSSSKIEVPIVVNRESNNYDPVGRTITVHWNSKEDIANKIKSFGDGNGLTWNGNS
PKQNPTVEIVNTKDVPSTDKPGESKVQVKVKYSDGSSDVATVTVKVLDPQNKDYTPEGQT
INIDYNKTPNTGISSKITGVGKDKGISFGKDKQGKDITLPEGASIAIDDKAKTVPDGTQP
GTFDIPVTITYKDGSKDHATVKVTVGKPQSETHTPKVDGGITKKYGESGPSDNDIIAKVT
VPNKPNGTTITVDKGQTPIDTKTPGTVNVKVTVKYPDGSEDHVEVPVTVGEPDNETYKPS
AEAINKKRNEKAPDADEIKKAVKTSTVKNKTAPKETKVELVDPKTPLPTTDKTGTTNVPV
KVTYPDGSSTVVQVPVVVTDTDATANTPAVDPVEEPYGTDKEKTKKAVTAAVTVPDFKPK
KDGDKPTVTITSADKDIPDGTKPGTYHVKVKVTYPDNTTDEVTVDVTIKNKQSDTFEPKA
TPVVKPFGKKVTSDDVTGNVTVPNWSKDSKEQPKIELNEPNTKLPDGKTPGNSTVKVKVT
YPDGTTDTVDVPVTISDKQSELYPPKADNLEKDNGQKPSDDEIIGKVSVPTWPTNETNKP
TYSIAEGDKSKIPNGDKAGKFEVPVTVTYPDGSTTVINVPVTIKSPTATAKVVTVPKGVE
PKPEDSIANKDKFPDGTKFEWDNNGKPDTSKEGNSVKGKVKITIPGSDTPQEVEVKVNVV
DPSASEVNVPQGKDLPEAKDVIKDSHDTSKFPNGTTFEWKPEDKPDTNNPGAKNGKIIVT
IPGQKPVEVSVTVNVLPKPEANVVNVPQNGTLPEAKDVIKDSSDTSKFHNGTTFEWEDSG
KPTTDTVGEKTGGKVKVTIPGVNGKSGYTIDVPVTVNVNPVPIAKETTVPQNSNPDPKNS
IDNNNKLPKGTTFEWKKDAAPKTDKPGTASGTVIVKIPGQAPQEVPVTITVTASPEGNDV
TVLQKTDGKDNTPQPKDVIKNNGDLPENAKTSWKKKPDTSKTGNQPGIVTVKVPGEPDVD
ISVNVFVVPNPAGKTVSVHVGDSPSAENSIANKNELPNGTKFAWATNGTPDTKTAGNNKS
GTVVVTIPGIANPVNVPVTVNVVAQNKPFINDGKAENKPGDKGSADNGKTTITGKGTPEA
TIKVQNSNGTALKDGNKEITVTVDKDGNFTVDVPHQTPGTTLKLVPNKGGVDGDATTVTV
TAKPQKPTITVPTDNQKNDGNVTVTPPTDDTTVVKIEINAKPNSINGPEQPVRTIIAKKD
NDGKWKIDGDAPDGVTVNPNTGVVTIPTKNLEDGSTITAVSKNKTDKPSDPATAVTGFKT
PQISEQTLKDNPDDSTKQIITGKTLPGATVTVTDNNGNQIGTGTADKDGNFTITIDKQKP
GAIVTLTPTNGKGDGAKTGDSVNITIGGNITKPNIDTPTNGGASVTPDLTDTRVNKVVVT
YTPEGSETTATITVVAEGDKHEWKIDGDAPEGVTVNPQTGVVTIPANKIKSGSTITAQSE
DSSDKTGKSKSEVVTAKVAEKEKPAPEPTPTPAGEPTILTPQDGVEQGSATVTPPADADT
LEITYTPEGDTTTPVTITVKKDKNGNWTIDGNTPTGVTVDPKTGKVTIPATQIKDGSTIT
AQAKKNGQPSNMANGKVGNNPTKKPTPTPEPAPTPEPAPAPTPEHESGSHDSDEHTGNSE
NNRNKSNNTQLQAPKSPAHHSSGQVAQSKLTNTGSAIAAASTVAALAGAIGAALAVIIRR
KKRD
NT seq
9195 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagcaaccgcaaaaagcatgcacgcgagcaagttgagagctcgtttaaaaac
gttgattcatcttctgcgtatgcaaccatgcgcaaggtttcattgagcacacttgccaca
gttctcactgcagcaacctgcttgggtggtcagccaatcctcgcatcctctaatattctt
cttcctccaactacggcagcttttgcgcaagaagtgcgtaacgctgatcctactccttgg
ctgcatacgccaaatattcttgagttccaaaggtatcgctttgctaacagcaacggaaaa
atcggtcaaataggatccgacggtttgggtgattacgataacaccaccaagaaatcggat
atgtatgcacatcttgaaaagaacggaaacgaccagtacctaatcttcgatgtgttcttt
aacaacgacggtaaagatatgactggcgcttccaaacaacaacagtatgtttggcaaatt
ccttttgcagttgctgacttaaataatggttattacaatgtagacacattaagtgattta
agctttaatttttataaacgaaatggcactagtccacaaacaacaaacgctgttctttca
cgcgatttttcattattcactaaagaaaatagccagtcagcaacacttagtaagcctttg
caagatgaccagcaccttggaaattctatttacaaaataaccttaggcataagaggagga
aacagcaacaagcaagatttgagtgatactttccacaagaatgcaggcgacggggttatt
agcaatgctacaacattaacaggcgtatataagggcaagagctacggcatcggcttaaga
actacgaacgtcgactatgcagtacacatgcattgcaaagtaaaattacgtcaaggagtc
actcttgacgacattcaagatgcttatacatgggcaaatacaagtacttatggtagaacg
actaactcggcttacacctttatttctggtcgcgagcgctggaaagaaccaaatcttaag
cgcacaaaaagcgacaatttacctccaaagctgtattttaatggcaaagagattagcgat
tccaacaacagcattaccgtgtatcagggcgatactcctacaatcaaattcggaacatct
gacgacagtggaaaggttaatagcttctcagttaagggtcttcctaacggtaatggagat
gtcactgaaaacagtaatggcatggaagcaactgaagctaagcatcacaaccatgttgtt
aatagagttaagtttgaatataagaacggcaacacgccagcaaatactgactacacggtt
actgtctctgcaaccgacgcttctggaaacaaagtagaaaagaaagttacagtacatctt
aaaaatctgaaccagaagtacaaggctccaaccactacaccgattactgttgattgggga
cataaggcaactaatgaagaattaaagaaacatgtttctaatattgaaggcggtggacaa
ctagatttcaatactttcccagagactaaactaccagatatagcttttaatgggaaagac
actgctacaatatccacatcagcaaaagtaatatattcagacaattcgtaccatattgtt
acgattcctgtaattgtcagaaagccgctcgcattgcaacacaaaagcgagctgaaagat
cacgaagttaaagtaaatgttggcgacactcttactaaaacaggaaacaaggttgacgct
aagcaatatcttggcataaccgataagaatgttaaagataaaattaagagcgcagagtgg
gtgaacggcgaaccttccacaaacgttgcgggaaagaagacttacactgctaaagtcaca
tttagcgacggcagtactgcagaagaaaaggtcactttcactgttcgccctcaaaagcct
aagattgagactgatttgactggcgttgcaggtgtaaaaggcaaggaagttgtagttaat
gctggtcctggcacagctggaagcactgtaacgcttaaagatagcaagggcaatcaaatt
ggaactggaaaagttggcaacgatggcaaagttacaattacagttgctaacggcattcct
gaaggaaacattactgcagtaactactactgcagattccgtaagctctgacgcaagcgac
gctaagaaggctactaaggatgacaaagctccaacgcttactgctgataaagatagcgtt
accgtaaaagttggcgaagatctgaaaattcagcttactgcaaaagatgatgtaaagatt
gaatctattgacacagcaacagcaacgatggcttttgctcgaaatgatttcagtaagatg
atggctgtcgcagcgcgtgcaaaaactgattacacgaagaatagtgataaggaaaaggtt
ttcacttataacttctccggctttaagcctgaagaagttggcacttatactcttacgttc
tccgcaactgatgctgctggtcacaaaacagaaaaaactgtgactgtaaaagtggagaaa
aaagaagacattaagtcaaagaatattgctgttgacttaggtcacaagctcaccgaaaaa
gacgccgaaaaagctattgccaacggaagaaagcttaaaaaagcaggcgcaaccttcaag
tggagcactgaaactggcggaactccagacacttccactgttggcaaggaaaagactgga
aaagttattgtaactattcctactaacgacaaaaatcacccacgcgttgaaactgttgac
gttaaggtaactgttagggataacgaaagtcctaaagttgcgattcagcaaaagggcgac
ggtggtacatataacaccattgatcctggatatccagatggtccaaaatacccaccagta
tttactattactacataccgcggtgataagaacgatattaagattactgcaacagacaac
agtggcaacgttacaactcttactttaacgcctaaaactccaggagaaacagaaaaagct
cctaccggaactggcacaactacagatcctaagactttgacgcttgatggcactactccg
ctcaacactaagcctggcgagtatacgcgtaccttaaaagcggtggatccttcgggcaat
cttaatgaagtaactgttaagtttattgttaagccgcaatccgacaaatatggtgatgtt
aaaggcacgcctgttacgtacaacatgggcagcggcacaaagcatccagatcctaagagc
ggtattaatgcagatgatctaaagaaactacctagcgacgctacctactcttgggctaag
gaaccagattggaataagcctggcgagcagaaagatgctaaagttcgcataacatttaag
gacggttcaactaaagacgttactacaaccgttaccgttaaggacgatatcgcgcctgtt
attaacacacctagtaccaataaggcaaagagagcagacactgagaaaacagctgagtac
taccagttcaaggtgcataatggcaaaccgttcagcattgatatcaacgcttatgacaac
agcggaaagattaagagtgcaacaatagcaacattcccaggtcatgacggaaaaatcact
attgacaatcaaaacgggaattctgcagaaaagcctgcgactattcatattaagggcact
gcaaaacgagatgcgagtataactaattcgtccgataacaagtggtctcgtgagcttgtt
gttacagacgaagctggcaacgagtctaagcttaaggttcaaatctccgtgtacacggat
gctgaagagcatactgctactgctaagcaagttgataatcctaaggataacaacgcaatt
accaacgcgatcacaataacaaaatatgataatccaaatacgccaatcgataagactggt
ataacatttgaagttggaaaaattcctacagatgatggaaattacactgttcctgtaact
gttaaatatccagatggatcttccagcaagattgaagtgcctattgtcgttaatagggag
tctaacaactacgaccctgttggcaggacgattactgttcattggaattctaaggaagat
attgcaaataagattaagtcgtttggcgatggcaatggcttgacgtggaatggaaactct
ccaaagcaaaatccaacagtagaaatcgtcaacacaaaagacgttccaagcaccgataag
cctggcgaaagcaaagtgcaggttaaggttaagtattcggatggctctagtgacgttgca
acagtaactgttaaagttttggatccacaaaacaaggattacacgccagaaggtcaaaca
attaacattgactacaataagacgccgaatacaggtatatccagcaagattaccggcgtt
ggcaaggataaaggcattagctttggtaaagataagcaaggcaaagatataacgcttcca
gaaggcgcaagtattgctattgacgacaaagctaagactgttccagatggcactcagcct
ggtactttcgatattcctgtaaccattacgtataaggatggctctaaagatcacgcaaca
gtaaaggttactgtaggaaagcctcaaagtgaaactcatacgccaaaggttgacggcgga
atcactaagaagtatggagaaagtggcccttctgacaatgacatcattgctaaagtcact
gttccaaacaaaccaaatggtacaacaattacagttgataaaggtcaaacacctatcgac
actaagactcctggaaccgtaaacgttaaggttactgttaagtatcctgacggttctgag
gatcacgtggaagttcctgtaacagttggcgagccagataacgaaacctacaagccaagc
gcagaagctatcaacaagaagcgtaatgagaaagctcctgatgctgatgaaatcaagaag
gctgtaaagacttctacagttaagaacaagactgctccaaaggaaacaaaagtagagctt
gtagatccaaaaactcctctaccaactacagataagactggcacaactaacgtacctgtt
aaggtcacatatccagatggttccagtactgttgtgcaagtacctgtagtagttacagac
actgatgccactgcgaacactcctgcagttgaccctgtagaagagccgtatggtactgat
aaagaaaagaccaagaaagctgttacagctgctgtaactgttcctgattttaagccaaag
aaggacggcgataagccaacagtcactatcacaagcgccgataaggatattccagacggc
acaaagcctggcacttatcacgttaaggttaaggtcacgtacccagataacacaactgat
gaagttactgttgatgtgactattaagaacaagcagtcggatactttcgagccaaaagca
acgcctgttgttaagccgtttggcaagaaggttacatctgatgatgtaacaggcaatgta
actgttcctaattggtcaaaagattcaaaggaacaaccaaagattgagttgaacgagcct
aacacaaagcttccagatggtaagactcctggaaactctactgttaaggttaaagtcacc
tacccagatggcacaactgacactgttgacgtgccagtaactattagcgataagcagtct
gaactttacccacctaaggcagataatcttgaaaaagataatggtcaaaagccttcggac
gacgaaattatcggcaaagtaagtgttcctacctggccaacgaacgaaacaaataagcca
acttactctattgctgagggagataagtctaaaatccctaatggagataaggctggcaag
tttgaagtgcctgtaacagttacgtatccggatggatcaacaactgttattaacgtacct
gtaactattaagtctccaactgctacagctaaagttgtgactgtgccaaagggcgtggaa
cctaagccagaggacagcattgccaataaggataagttccctgatggcactaagttcgag
tgggataacaacggaaaaccagacacatctaaggaaggtaacagcgtaaaaggcaaagta
aagattactattcctggatctgatactcctcaagaagttgaagtaaaggttaacgttgtt
gacccaagtgcatctgaagtcaacgtgccacagggcaaggatttgccagaagctaaggat
gttattaaggattctcacgatactagtaagttccctaatggcactacgttcgagtggaaa
cctgaagataaaccagatactaacaatcctggcgcaaagaatggcaagattattgttact
attccaggtcaaaagcctgtggaagtgtctgtaacagtgaacgttttgccaaagccagaa
gcgaatgttgtgaacgttccacaaaatggcacattgccagaagctaaggatgttattaag
gattctagcgataccagtaagttccataatggcactacgttcgagtgggaagatagtggc
aaaccaactacagataccgttggagaaaagacaggcggtaaagtaaaagtcaccattcca
ggtgtaaatggcaagtctggttatacgattgatgttcctgtaactgtgaacgtaaaccct
gtgcctatagcaaaggaaaccaccgtcccacagaacagcaatcctgatcctaagaacagc
attgataacaacaacaaactccctaagggaaccacattcgagtggaagaaagatgctgcc
ccaaagaccgacaagccaggcactgctagtggcacagtgattgtcaagattccagggcaa
gcacctcaagaagtgcctgtaacaattactgttacagcatcgcctgaaggaaatgacgta
actgtgctgcagaagactgacggcaaggacaacactcctcagccaaaggatgttattaag
aataacggagatttgcctgagaatgccaagacttcttggaagaagaagcctgatacgtca
aagactggcaaccaaccaggaattgtgaccgttaaggtgccaggcgagccagatgttgac
atttcagtcaatgtgttcgttgtgccaaatccagccggtaaaacagtgagcgtacatgtt
ggtgattctccaagcgcagaaaacagcattgccaataaaaatgagttacctaacggaacc
aagtttgcttgggcaactaacggtactccagataccaagacagctggaaacaataagagc
ggcactgtcgtggtaactattccaggtatcgcaaatcctgtgaacgtaccagtaacagta
aacgttgtggcacagaacaagccatttatcaacgatggcaaagccgaaaacaagcctggt
gataaaggttctgcagataatggcaagacaactattactggtaagggaactcctgaagcc
actatcaaggttcaaaacagcaatggcaccgcattgaaggatggcaataaagaaataact
gtcactgtagataaagatggcaactttaccgttgatgttcctcatcagacccctggcaca
acactcaagcttgttccaaacaagggtggagttgatggtgacgcaactactgtaaccgtc
actgctaaaccacaaaagccaacgattacggtaccgactgacaaccagaagaacgacgga
aacgtaactgtaactccgccaactgatgacacaacggttgtaaagattgaaatcaatgct
aaaccgaattcaatcaatggtccagaacagccagttcgcacaattattgccaagaaggat
aacgatggtaagtggaagattgacggagacgctccagatggcgtaactgttaatccaaat
actggcgttgttacgattccaacaaagaatttggaagacggcagcactattactgcagta
tctaagaacaagacggacaaaccatctgatcctgctactgctgtaactggctttaagact
ccacagattagtgagcaaacgctaaaagacaatccagatgattctactaaacaaatcatc
actggaaagactcttccgggcgcaacagtaactgttaccgataacaatggcaatcaaatc
ggaactggtaccgcagataaagatggcaacttcactattactatcgacaagcaaaagcct
ggtgccatcgtcaccctcacaccaaccaacggtaagggtgatggtgcaaagacgggcgat
agcgtaaatattactattggcggaaatattactaagccgaatattgacactccaaccaat
ggtggtgctagcgtgacgcctgatctcacggatacgcgcgtgaacaaggttgtagttact
tacactccagaaggcagtgaaacaaccgcaacgattactgttgttgctgaaggcgacaag
catgagtggaagattgacggagacgctccagaaggcgtgactgttaatccgcaaactggc
gttgttacgattccagcaaacaagattaagagcggtagcactattactgcgcaatcagaa
gacagtagcgataagactggcaagagcaagtcagaagtagtaactgctaaagttgccgaa
aaggagaagcctgcaccagaaccaacgccaacgcctgcgggtgagccgactatactcaca
ccacaagatggtgttgagcaaggttccgcaactgttaccccaccagcagacgctgatact
ctcgaaatcacgtatactccagaaggcgatacaacgactcctgtaacaattaccgtgaag
aaagataagaatggtaactggactattgacggtaacactccaaccggcgtgactgttgat
cctaagactggtaaagtcaccatccctgcaacccaaatcaaggatggtagtacgattacc
gcgcaagccaagaagaatggtcaaccatccaacatggcaaacggtaaagtaggaaataac
ccaaccaagaaaccaacaccaacgccagaaccggcaccgacaccggaaccagcacctgcg
ccaaccccagaacatgaatctggttctcatgattctgatgaacacactggcaacagtgaa
aacaacaggaataagagcaataacactcagttacaagctcctaagtctcctgcacatcac
tcctccggtcaggttgcgcaatcaaagttaaccaatacaggctctgcaattgctgcagca
agcactgttgctgcactcgcaggcgcaataggtgctgcactcgcagtcattattcgcagg
aagaagcgcgactaa
DBGET
integrated database retrieval system
