Gardnerella vaginalis HMP9231: HMPREF9231_0940
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Entry
HMPREF9231_0940 CDS
T01939
Name
(GenBank) LPXTG-motif cell wall anchor domain protein
Organism
gvh
Gardnerella vaginalis HMP9231
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Gene cluster
GFIT
Motif
Pfam:
Trypan_PARP
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
AEF31931
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Position
complement(1125138..1127411)
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AA seq
757 aa
AA seq
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MYVFTLLRYISLRGKMGKRTNIILTSAMMGIATAACAFCVAQSANAAETSAASSGVNTSV
NSSAATSNTPGGGALDSTSSEQAKSVDEDRSAPEETPVFDTAANYKKVGEDDDQIKYTYV
NNTTKKITNPFPDVISDDEIEKAFKNKETSVEKIYFKPAATSDNPNPKSEIVKNRFLKNV
DGEYIVYKVYKNDYVSGKNESQITSSQGVSVNGSISKDGSIYAGSEQTITASAEPVDFEL
NGYTVAKNCKKSIDIRSEYAFKNYLYLKLTYKYKFNFERFKFVYVYCHHAGCNTSYNRYF
SAADAQFHFVDDLQYRSKNPNGVDTDGKLKQRGNSDTHPSLTDADKKKGTLISSVPFYEI
AGLADISGTSAVITDKAAFYRTDSGDGKTSILSFDKDPDIKYAKRPILTDLTGKNIPGYV
YWDNDIDKPQNKNHEFANDKDTKEDPGNHYLSFAYEMKDGKPVKRLTRKHYYVTFRAIPT
QLVVKYKKSDGTFESNAKYELLDSGNAKIGNEFAAASGDIVASSINDLVTMMKSTDTTLL
KGFTGYLSNGAVYLTPGNYTVKPTAQAPEGYEWVVDSNKQDSKTSADINIGLQTGNTTAI
QFITFVLKKKPSPAPTPSPAPEPTPTPAPVPEPKPEPTPTPEPEPDVTPEPEQKPVPDVP
YVPEDSWIPLPEIIPENPEYSVVEQPVLNPVHSSDKPVEHSVEQSFKAVDAGEAYNVKAP
AKHLPDTGVSLVMSISALFVSLFAGFGLSMFKSRRKH
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgtttttacattattgcgttatatatctttaagaggaaaaatgggtaagagaact
aatataattttgactagcgctatgatgggtattgctactgctgcttgtgctttttgtgta
gcgcaaagtgcgaatgctgctgaaacttcagctgcttcttctggtgttaatacgtctgta
aattcttctgccgcaacttctaatacacccggggggggggctttagatagcacttcctca
gaacaggctaaatctgttgatgaagatagaagtgctcctgaggaaacgcctgtatttgat
actgctgctaactataagaaagttggcgaagatgatgaccaaattaagtacacttatgtg
aataatactactaaaaaaatcacaaatccatttccagatgtaatttcagatgacgagatt
gaaaaagcgtttaagaataaagaaacttctgtagaaaaaatttattttaagcctgctgcc
acttcagataatcctaatcccaaaagtgagattgttaaaaatagattcttaaagaatgtt
gatggagaatatattgtttacaaagtatataaaaatgattatgtttctggcaaaaatgag
tcacagattacttcatctcagggtgtgtctgtaaatggttctatatcaaaagatggtagt
atttatgcaggctctgaacaaacaattacagcttctgctgaaccagttgattttgaatta
aatggttatactgttgcaaagaattgtaaaaagtctattgatattcgctctgagtatgct
ttcaaaaattacttatacctaaaactcacgtataagtataagtttaattttgaaagattt
aaatttgtgtatgtttattgtcatcatgctgggtgcaatacaagttataatcgttatttt
tctgcagcagatgcgcagttccattttgtggatgatttgcaatatagatctaagaatcca
aatggggtagatacagatggtaagttaaagcagcgaggaaattctgacactcatccatct
ttaactgatgcagacaagaagaagggtactctaatatcgtcggttccattttacgaaatt
gcgggattggcggatatttctggtacttctgctgtaataactgataaagcagccttctat
cgaacagatagtggtgacggtaagacatctattttgtcttttgataaagatccagatata
aaatatgcgaagcgtcctatacttactgatcttactggtaagaatattccaggatacgtg
tattgggataatgacattgataagcctcagaacaagaatcatgagtttgcgaacgataag
gatactaaggaagatcctggtaatcactatctttcctttgcttatgaaatgaaggatggc
aagcctgttaagcgtcttacacgtaaacattattatgttacttttagagcaattcctacg
cagttggtcgttaagtataagaagtctgatggaacatttgaatcaaatgcaaagtacgag
cttttagattctggtaatgcgaaaattggcaatgaatttgctgctgcgagtggtgatatt
gttgccagcagtataaacgatctagtgactatgatgaagtcaactgacactactcttctt
aaaggttttactggttacttatctaacggtgctgtgtatttgactccaggaaactatact
gtaaaacctacagctcaagcgcctgaagggtacgagtgggttgtagattcaaataaacag
gattccaaaactagtgcagatattaatattggacttcaaactggaaatactactgctata
caatttattacttttgtattgaagaagaagccatctcctgcacctacgccatctccagct
cctgaaccaacaccaacaccggctccagttcctgagccgaaaccagagccaaccccaact
ccagaacctgagccagatgtgactcctgaacctgagcagaagcctgttcctgatgttcct
tatgtgcctgaagattcgtggattcctcttcctgagattattcctgagaatccagagtat
tctgttgttgagcagcctgtgttgaatcctgttcattcttcggataagccggtggagcat
tctgttgagcagagttttaaggctgttgatgctggtgaggcttataatgttaaggctcct
gctaagcatttgcctgatactggtgtttcactggttatgtctataagtgctttgtttgtg
tctttgtttgctggctttggtttgtctatgttcaagtctcgccgcaagcattaa
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