KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_1156
Entry
HMPREF9231_1156   CDS       T01939                                 
Name
(GenBank) putative dTDP-4-dehydrorhamnose reductase
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh00521  Streptomycin biosynthesis
gvh00523  Polyketide sugar unit biosynthesis
gvh00541  O-Antigen nucleotide sugar biosynthesis
gvh01100  Metabolic pathways
gvh01110  Biosynthesis of secondary metabolites
gvh01250  Biosynthesis of nucleotide sugars
Module
gvh_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    HMPREF9231_1156
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HMPREF9231_1156
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HMPREF9231_1156
Enzymes [BR:gvh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     HMPREF9231_1156
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     HMPREF9231_1156
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd NAD_binding_4 DUF6252 Polysacc_synt_2
Other DBs
NCBI-ProteinID: AEF31237
LinkDB
Position
1400578..1402020
AA seq 480 aa
MEFEKELSVTKTNIPGLIVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNE
KRGVTRGIHAEPWDKYISIATGEVFGAWVDLRPGKSFGQVYTTTLNPSKAIYVPRGVGNS
FQALQDGTAYTYLVNAHWSLEQKKTYTFVNLADPDLHINWPIPLEESERSEADLHHPMLK
NAKPMAPKRTLVTGCNGQLGRAIQNYAKENNLEGFEYVDLDSFDIANKDDYSRYDWDLYG
TIINTAAYTSVDGAQTLQGRRAAWNSNVKGVANLAKIAQEHHITLVHISSDYVFDGTQEN
HKENEDFAPLGVYGETKAAADSLVANVPQHYIIRSSWIVGEGRNFVTRMIDFANRLKNGE
SVSVQAPIDQTGRLTFASDLVKGMFHLLNTQAQYGTYNLTGSGKIASWHDIAQKVFTQLN
VDTSKIEANRVDDYTRISNGSPRPHKCALDLQKIESAGFTPCDWEDLLESYVNRIEQNNK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggaatttgaaaaagaactaagcgttacaaaaaccaatattccaggtttaatcgtattt
gatcttccagtacacggagataaccgcggatggttcaaagaaaactggcagcgcgcaaaa
atgacggctctaggtctccccgactttggacccgtacaaaacaacatttcgttcaacgaa
aaacgcggagtaaccagaggcatccacgcagagccatgggataaatacataagcattgct
actggcgaagtatttggcgcatgggtggatttaagaccaggtaaaagcttcggtcaagtg
tacacaaccacactaaaccctagcaaagcaatctacgttcctagaggcgtaggaaacagc
ttccaagctttgcaagatggcacggcatacacttatttagtaaacgcacattggtcacta
gagcaaaagaaaacatacacttttgtaaaccttgcagacccagatttacacattaattgg
ccaatacctttagaagaatccgagcgcagcgaagctgacttacaccacccaatgctaaaa
aacgcaaagccaatggcaccaaaacgcactcttgtaactggatgcaacggtcaacttggt
cgcgcaatacaaaattatgctaaagagaataatttagaaggatttgagtacgtagactta
gatagcttcgatatagcaaataaagacgattacagccgctacgactgggatttgtacgga
acgattattaacacagcagcatacacgtctgtagatggcgcgcaaacgctacaagggcga
agagccgcgtggaatagcaacgttaaaggagtggcaaatcttgcaaaaatagcgcaagaa
caccacattactcttgtgcacatctcaagcgactatgtttttgacggtactcaagaaaat
cacaaagaaaacgaagactttgcaccactaggcgtgtacggcgaaacaaaagctgcagca
gattctctagtagccaacgttccacagcattatattattcgctcaagctggattgtcgga
gaaggacgaaactttgtaacgcgcatgattgactttgcaaaccgtttaaaaaatggcgaa
tctgttagtgttcaagcaccaatagatcaaactggcagactcacttttgcaagcgactta
gtaaaaggcatgttccatcttctaaacactcaagcacaatacggaacatacaatcttaca
ggttcaggaaaaatcgcgtcttggcacgatattgctcaaaaagtgtttacacaacttaat
gtagacacaagcaaaatcgaagcaaatcgcgtagacgattacacgcgcatatctaatggc
tctcctagaccacacaagtgcgcacttgacttacaaaaaatcgaatccgctggatttacg
ccatgcgattgggaagatttgcttgaatcttacgtaaatagaattgaacaaaacaacaag
taa

DBGET integrated database retrieval system