Gardnerella vaginalis HMP9231: HMPREF9231_1232
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Entry
HMPREF9231_1232 CDS
T01939
Symbol
cgtA
Name
(GenBank) Obg family GTPase CgtA
KO
K03979
GTPase [EC:3.6.5.-]
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvh03009
]
HMPREF9231_1232 (cgtA)
Ribosome biogenesis [BR:
gvh03009
]
Eukaryotic type
Other ribosome biogenesis factors
HMPREF9231_1232 (cgtA)
Prokaryotic type
GTPases
HMPREF9231_1232 (cgtA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP1_OBG
DUF1967
MMR_HSR1
FeoB_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AEF31765
LinkDB
All DBs
Position
complement(1493204..1494868)
Genome browser
AA seq
554 aa
AA seq
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MSDFVDRVTVHVKGGDGGNGSAGVRREKYKPLAGPNGGNGGNGGSVIFVADRNANSLLDY
RFMPHRVAQSGTMGLGDTKDGSKGEDLMLPVPVGTVIFEAKGASGAQKKPGNVLADLQHV
GDTFVVAAGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAG
KSSLVASISAAKPKIADYPFTTLVPNLGVVSFGEYRYTIADVPGLIPGASEGKGLGLEFL
RHIERTEIIAHVIDCATLEPNRDPISDYKALEHELSQYANKLDLPLGAIPIPERPRIIVL
NKIDVPEAKELAEFVRSDFEKMGFPVFEISTASHEGLKELGFALGKMVASMREKLAEQEA
AREEERVVIQPLEQPALRRRRDDGRGSASDFTIEREEDKNGDFWFTVTGAKPERWVVQTN
FDNDEAVGYLADRLAKLGVEDELRKKGARPGDEIRIGRGNRMVCFDWDPSIAAGAEGLDG
ASLGARGKDLRLEANDPRGARRTNAERRRDYHMMMDAKSAVRDAMMAERKQGHWADPSVD
DDKHDEQSLFGRGE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttgtagatcgagtaacagtacacgttaaaggcggcgacggcggcaacgga
tccgcaggcgtgcgcagagaaaaatacaagccacttgcaggtccaaacggcggaaatggc
ggaaatggcggaagcgttatattcgtagccgatcgcaacgctaacagcctactcgactac
cgattcatgccacatcgcgtagcgcagagtggcacaatgggtttaggtgatacaaaggac
ggctccaaaggagaagaccttatgttgccagtgccagtcggaaccgtaatttttgaggcg
aagggtgcatcgggcgcgcaaaaaaagccaggcaacgttttggctgatttgcaacatgta
ggcgacacattcgtagtcgcagcaggaggtgctggaggccttggaaacgccgctcttgcc
aataaaactcgccgcgctccaggttttgcactactaggcgaacctggcgaagaacgagac
gtaatcctagaactaaagtcgatagcagacgtcgcgctagtgggcttcccgtctgcagga
aagtcaagtcttgtagcttcaatcagcgctgcaaaaccaaaaatcgcagattatccgttt
acaacgcttgttccaaaccttggtgtggtcagctttggtgaataccgctacacaatcgca
gacgtgccaggattgatcccaggagcttccgaaggaaaagggcttgggctagaatttttg
cgccacattgagcgcacggaaataatcgcccacgtaatcgactgcgcaacgcttgaaccc
aatcgcgatccaatcagcgattataaggctttggaacacgagctttcgcaatacgcaaac
aagttggatttgccgcttggagcgattccgattccagagcgtccgcgaattattgtgcta
aacaagattgatgtgccagaggcaaaagagttggcagaatttgtgcgaagcgactttgaa
aaaatgggctttccagtttttgagatttctactgcgtctcacgaaggcttgaaagagctt
ggttttgcgcttggaaagatggtggctagtatgcgcgaaaagcttgctgagcaagaggca
gcgcgagaagaagagcgagttgttattcagccgcttgaacagccagcattgagacgacgc
agagatgatggccgcggaagtgctagcgactttacaatcgagcgcgaagaagacaaaaat
ggcgacttctggtttactgttacgggcgctaagccagagcgttgggttgtgcaaacaaac
ttcgacaacgacgaggcagttggctatttggcggatcgcttagcaaaacttggtgtagaa
gacgagttgcgcaagaagggtgcacgtccaggagacgagattaggattggtcgcggaaac
cgcatggtttgcttcgactgggatccaagcattgcagcaggtgcggaaggtttggacggc
gctagcttgggcgcgcgtggaaaagacttgcgacttgaagcaaatgaccctagaggtgca
agacgcacgaatgcggagcgcagacgcgattatcacatgatgatggatgcaaagagcgct
gtgagagatgcgatgatggcggagagaaagcaaggtcattgggcagatccatcagtagat
gacgacaaacacgatgagcagagtttatttggacgtggtgagtaa
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