Galeopterus variegatus (Sunda flying lemur): 103599235
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Entry
103599235 CDS
T08727
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103599235 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvr03400
]
103599235 (LIG4)
Enzymes [BR:
gvr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103599235 (LIG4)
DNA repair and recombination proteins [BR:
gvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103599235 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
RTT107_BRCT_5
ATG17_like
Motif
Other DBs
NCBI-GeneID:
103599235
NCBI-ProteinID:
XP_008581571
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MAASQASQTVASHVPFSDLCSTLERIQRSKGRAEKIRQFKEFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGIHG
DAGDFAMMAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNTAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKQQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYTD
QFGAAPHEGSLTPFIHNAFKTDTQVCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILSSTLTTIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGLRGGLM
SHFLCAVAEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLANHWKPFHKKAPPSNILC
GTEKPEVYIEPCNSVIVQIKATEIVPSDMYKTACTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHLYVGGDEEPQKKKRKAAPKKVIGIIEHLKAPNLSNINKVSNIFEDV
EFCVMSGTDGHPKPDLENRIAEFGGYIVQNPGPDTYCIIAGSENIRVKNIITSNKHDVVK
PAWLLECFKTKSFVPWQPHFMIHMCPSTKEHFAREYDCYGDSYFVDTDLDQLKEVFSGIK
NSNEQTPEEMASVIADLEYRYSWDHHPLSMFRNHTIYLDLYTVVSDLSTKIEGTRLAIKA
LELRFYGAKVVSYLAEGVSHVIIGEDHSRVADFKAFRRTLKKKFKILQERWVTDSIDKCE
LQEENQYLI
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaagcttcacagactgttgcatctcatgttcctttttcagatttatgt
tctacgttagaacgaatacagagaagtaaaggacgtgcagaaaagatcagacaattcaag
gaatttttagactcttggagaaaatttcatgatgcccttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgcaaagctttatattgaattgcttaacttacct
agagatggaaaagacgcccttaaacttttaaattacagaacaccgactggaattcatgga
gatgctggtgattttgcaatgatggcatactttgtgttgaaaccaaggtgtttacagaaa
ggaagtttaactatacagcaagtaaacgaccttttagattcagttgccagcaataatact
gccaaaagaaaagacctaataaagaagagtcttcttcaacttataactcagagttcagca
cttgaacaaaagtggcttatacggatgattgtgaaggacttaaagcttggtgttagtcag
caaactatattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgatccttctgtaggacttagtgatatttctatc
actttgttttctgcctttaagccaatgctagctgccatagcagatattgagcgcattgaa
aaggacatgaaacaacagagtttctacattgaaactaagctagatggtgagcgtatgcaa
atgcacaaagatggagatgtatatcagtacttctctcgaaatggatataactatactgat
cagttcggtgctgctccacatgaaggttctcttaccccattcattcataatgcattcaaa
acagatacacaagtctgtatcctggatggcgagatgatggcctacaaccctaatacacag
acttttatgcagaaggggaataagtttgatattaaaagaatggtagaagattctgatctg
cagacttgttattgtgtttttgatgtattgatggttaataataaaaagctaggacatgag
actctgagaaagaggtatgagattcttagtagtactcttacaacaattcctggtagaata
gaaatagtgcagaaaacacaagctcatactaagaatgaagtgattgatgccttaaatgaa
gcaatagataaaagagaagagggaatcatgataaaacatcctctgtccatttataagcca
gacaaaagaggtgaaggatggttgaaaattaaaccagagtatgtcaatggactgatggat
gaattagacatcttaattgttggaggctattggggtaaaggtttacggggtggactgatg
tctcattttttgtgtgcagtagcagagaagcccccttctggtgaaaagccatctgtgttc
catactctctgtcgagttggctcaggttataccatgaaagaactgtatgatctgggtttg
aaattggccaaccattggaagccgtttcataaaaaagctccaccaagtaacattttatgt
ggaacagagaagccagaagtttacattgaaccttgtaattctgtcattgttcagattaag
gcaacagagattgtccccagtgacatgtataaaactgcttgcacgttgcgttttccacga
attgaaaagataagggatgacaaagagtggcatgaatgcatgactctggatgacttggaa
caacttaggggaaaagcatctggaaagcttgcatctaaacacctttatgtaggtggtgat
gaagagccacagaagaaaaagcggaaagctgccccaaagaaagtgattggaattattgaa
cacttaaaagcacctaatctttctaacataaataaagtttctaatatatttgaagatgta
gagttttgcgttatgagtggaacagacggccatccaaaacctgacctggagaacagaatt
gcagaatttggtggttacatagtacaaaatccaggtccagatacgtactgtataattgca
gggtctgagaacatcagagtgaaaaacataattacttccaataagcatgatgttgtcaag
cctgcatggcttttagagtgttttaagaccaaaagctttgtgccatggcagccacacttc
atgattcatatgtgtccatcaacaaaagaacattttgctcgtgaatatgattgctatggt
gatagttattttgttgatacagatttggaccaactcaaggaggtattctcaggaattaaa
aattctaatgaacagactcctgaagaaatggcctctgtgattgctgatttagaatatcgt
tattcctgggaccaccatcctcttagtatgtttcgaaaccacaccatttatttggacttg
tatactgttgttagtgacttgagtaccaaaattgagggaacaagactagctattaaagcc
ttggagcttcgattttatggagcaaaagtagtttcttatttagctgagggagtgtctcat
gtaatcattggggaggatcacagtcgtgttgcagattttaaagctttcaggagaactctt
aagaaaaagtttaaaatcctacaagaacgttgggtaactgattcgatagacaagtgtgaa
ttacaggaagaaaatcagtatttgatttaa
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