Geobacillus sp. Y412MC61: GYMC61_1888
Help
Entry
GYMC61_1888 CDS
T01101
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gyc
Geobacillus sp. Y412MC61
Pathway
gyc00300
Lysine biosynthesis
gyc00550
Peptidoglycan biosynthesis
gyc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GYMC61_1888
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYMC61_1888
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gyc01011
]
GYMC61_1888
Enzymes [BR:
gyc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GYMC61_1888
Peptidoglycan biosynthesis and degradation proteins [BR:
gyc01011
]
Precursor biosynthesis
Amino acid ligase
GYMC61_1888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
PGA_cap
DUF1611
Sulfatase
Ribosomal_S5_C
RraA-like
YqeC
Motif
Other DBs
NCBI-ProteinID:
ACX78512
LinkDB
All DBs
Position
1908690..1910159
Genome browser
AA seq
489 aa
AA seq
DB search
MKLLTLLSHLPGFWVHHGGNPDIVALEMDSRRVAPGSLFFCLKGFTVDGHDFAEEAVARG
AAAIVAERPLSVDVPVVLVSDSRRAMAILADAFYGRPTHRLHLIGVTGTNGKTTTTSIME
QIARKAGKKTGLIGTVHIKVGDRSYPAANTTPESLILQRTFKQMVDEGVEFVAMEVSSHA
LHQGRVHGCDYDVAVFTNLTQDHLDYHGTMEEYRNAKGLLFAQLGNRYDERRPKFAVLNH
DDPVSQYYKHMTAAPIVTYGMREKSDVMAEQIRITAGGMAFRLCTPHGSAAVETKLVGSF
NVYNILAAAAACLASGFSLETIAAALADVEPVPGRFETVDEGQNFTIIVDYAHTPDSLEN
ALKTVRQLAKRNVYVVIGCGGDRDRSKRPLMAQVAVRYADVAIFTSDNPRSEDPKQILRD
MEAGVSAEIGKHVTIPDREEAIRYAIGQAQEGDVVLIAGKGHETYQIIGNDVIEFDDRAV
ARAAVKERG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctgacgctgctgtcacacttgcccggtttttgggtgcaccatggaggcaat
cccgatatcgtggcgctcgaaatggactcgcgccgcgttgcccccggttctctctttttt
tgccttaaagggtttacagtagacggacacgactttgccgaggaagcggtggcgcgcgga
gcggcggcgatcgtggccgagcgaccgctttccgttgatgttccggtcgttcttgtgtcg
gacagccggcgggcgatggcgattttagcggacgcgttttacgggcggccgacccaccgc
cttcatttaatcggagtgacaggcacaaacggcaagacgacgacaacgtcgatcatggaa
caaatcgcgagaaaagccggcaagaaaacagggctcattggcacggttcacatcaaggtc
ggcgaccgctcctatccggcggccaatacgacgccggagtcgctcattttgcagcgcacg
tttaaacagatggtcgatgaaggagtggagtttgtcgccatggaagtgtcgtcgcacgcg
ctgcaccaagggcgggtgcatggctgcgattacgatgtggccgtctttacgaacttaacg
caagaccatttggattatcacgggacaatggaagaatatcggaacgccaaagggcttttg
tttgcccagctcggcaaccgctacgacgaacggcggccgaaatttgccgttctcaatcat
gacgatccggtttcgcagtattataaacatatgacggccgcgccgatcgtcacatacggg
atgagggaaaaaagcgatgtgatggcggaacagatccgcataaccgcaggcggcatggcg
tttcggctttgcacgccgcacggatcggcggcggtcgaaacgaaacttgtcggctcgttc
aatgtctataacattctcgccgctgccgctgcctgccttgcctctggcttttcgcttgaa
acgatcgccgcggcgcttgcggatgtcgagccggtgccggggcggtttgaaacggttgat
gaagggcaaaactttacgatcatcgtcgattacgcccacacgccggacagtttagaaaat
gccttaaaaacggtgcgccaattggcgaagcgaaacgtgtatgtcgtcatcggctgcggc
ggcgaccgcgaccggtcgaaacggccgctcatggcgcaggtggcggtgcggtatgcggat
gtcgctatttttacctccgacaatccgcgttcggaagacccgaagcaaattttgcgcgac
atggaagcgggagtaagcgctgagatcggaaagcatgtgacgattcctgaccgtgaagag
gcgatccgctacgccattggccaggcgcaggaaggcgatgttgtgttgattgccggcaaa
gggcatgaaacgtatcaaatcattggcaacgatgtgattgagtttgacgatcgcgctgtt
gcccgagcggcagtgaaggagagaggatga
DBGET
integrated database retrieval system
