Geobacillus sp. Y412MC61: GYMC61_3272
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Entry
GYMC61_3272 CDS
T01101
Name
(GenBank) alpha amylase catalytic region
Organism
gyc
Geobacillus sp. Y412MC61
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
AMPK1_CBM
CBM_20
GlgE_dom_N_S
Malt_amylase_C
fn3
Alpha-amylase_N
Cyc-maltodext_C
Big_13
SusF_SusE
NDNF
Motif
Other DBs
NCBI-ProteinID:
ACX79826
LinkDB
All DBs
Position
complement(3324534..3329465)
Genome browser
AA seq
1643 aa
AA seq
DB search
MLSLVLASVLLLALTPFQAVAAANEAGSSSALGNGAHRWTAESTASQPRTITLVGNLQDE
LGHTAEWDPGALATRMHDEGNGLYTFTGTLPAGTYEYKIAVNGSWDENYGAGGRNGANLV
LKLDRQTEVTFYYNDRTHAIADSTWYTAIAKEKQPRLVGTVLPAIGYEGENNGWTPGTST
ALLTDDDFDSVYTFTARVPKGSYEYKIVLGNNWNESYPQENARLTVLETTTITFFFNAKT
KEVYTDYNPNGSDGVVQKDRLKHNTWDTLYRQPFGAVKAGTKVTLRLAAKKGDLTKADVY
VKNATTGTAKVYPMEKVGVLGDDEYWEAAFTPSAPGVYGYKFIAVDAGMKAEYGEDTKEG
QWGRAVDKNAELFQLTVYDPNYKTPDWMKEAVVYQIFPDRFFNGNPSNDNSKQQARGAQP
IEHRDWSDLPDNPRLKGTSGYDGDGEWSNDFFGGDIAGIEQKLDYLQSLGVNTIYLNPIA
NAPSNHKYDASNYKELDPMFGSPEEFQSFVQALANRGMHLILDGVFNHVSDDSIYFDRYH
RYPTVGAYEYWEAVYDLMNEKGLSEEEARKQVEEKFKQEGQTFSPYGFHLWFNIENKKVD
GHYQYQSWWGYDSLPEFKSVTGEKVPHPSELNNDALANYIFRESDSVAKSWIARGASGWR
LDVANEVDPAFWREFRQELLQGSYDRGPTLKEGEQPLILGEIWDDASKYFLGDQYDSVMN
YRFRGAVLDFLKNGNAEEADKRLTAIREDYPSEAFYALMNLIGSHDTARAVFLLGNGTDS
SERVELDPNYNEELGKKRLKLAVILQMGYPGAPTIYYGDEAGVTGSKDPDNRRTYPWGKE
DQNLLSHYQKVGHIRQHHQSLLAHGDIKTVYAQGDVYVFARQYGREAALIAVNRGNEDKT
VALDVASLLPNGTVLTDELHDGGKATVAGGTLTVTIPALDGRMMFGTVTVEMPAAVSNLQ
ASPSDGRVMLTWEGNASRYRIYESTLRGAGYTMVQETETTSATIGSLTNGTAYYFAVAAV
DENGNESPKVETNRVVPHYPLTSDNVQFVTTLSDATLDLSKPQQVDVHVNIDNVTSKGAA
DGLQAVLQVKGPHDETWKEYRASYQGQDGDANVFRASFTPLAAGTYTYRYALTTNLGEEW
VYTAEKQVTFAADSSDQIAPADAIELRQPAVESGQVNLSWTFVGKKDGDAYLLAIERNGD
IVHTTTSIGDSFTDYDVENGTEYTYVVKLYDRAGNVVESNTVKVTPDIVMVKVIFKVKAP
DYTPLDARITIPNSLNGWNTGAWEMSRNGAVTPDWQFTVEVQEGETITYKYVKGGSWDQE
GLADHTREDDNDDDVSYYGYGTTGTDLKVTVHNEGNNTMIVQDRILRWIDMPVVIEEVQK
QGSQVTIKGNAIKNGVLTINGERVPIDGRMAFSYTFAPASHQKEVSIHIEPSAESKTAIF
NNDGGAIAKNTKDYVLNLETKQLSEGKLTTPPSNGDSPGSETPSHDGGATPGNGTSPGSG
GPSDGASPGGSVPPGGTAPPGNEAPPSRPPQKPSPSKPKEKPRKPTTPPGQVKKVYWDGV
ELKKGQIGRLTVQKPINLWKRTKDGRLVFVRILQPGEVYRVYGYDARFGGQYAVGGGYYV
TDIDTHIRYETPSKEKLKLVNGE
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgctatcattggttttggcatcggtgttgttgctggcattgactcctttccaggcggtt
gccgctgcgaacgaggcaggaagttctagcgctctagggaatggagcgcatcggtggacg
gccgaatccacggcctcgcaaccacggacgatcacgctagtcggcaatttgcaagatgag
ttgggccatacggcggaatgggatccgggggcattggcgacgaggatgcatgatgaaggg
aatgggctttatacattcaccgggacgctgccagccgggacctatgagtacaaaattgcg
gtcaacggcagctgggatgaaaattacggcgccggcggtcgcaatggcgcaaatctggtg
ttgaagctggatcggcaaaccgaggtgacgttttattacaatgaccggacgcatgcgatc
gcggattcgacatggtatacggcgattgcgaaggagaaacagccgcgtcttgtcgggacg
gtgctgccggccatcggctatgagggggagaacaacggatggactccagggacatcgacg
gcgctgttgaccgatgatgattttgactcggtgtacacgtttacggcgcgggtgccgaaa
ggatcgtatgaatataaaattgtgctcggaaacaattggaacgagagctacccacaagag
aatgcacgcttaaccgttttggaaacgacaaccattacattcttcttcaatgcgaaaaca
aaagaggtgtacaccgactacaaccccaatggctctgacggtgttgttcagaaagaccga
ttaaaacacaatacatgggatacgctgtaccgccagccgtttggcgcggtgaaagcggga
acgaaggtaacgcttcgtcttgcggcgaaaaaaggcgatttgacgaaagcggatgtgtat
gtgaaaaatgcgacgactggaaccgccaaagtctatccgatggaaaaagtcggcgtgctc
ggggatgatgagtattgggaggctgcgtttactccttctgcgccgggggtatacggttat
aaatttatcgctgtcgatgccgggatgaaggcggaatatggcgaagatacgaaagaagga
caatgggggagggcggtcgacaaaaatgcagagctgttccagctgaccgtctatgatccg
aattacaaaacaccagattggatgaaagaagcggttgtgtatcaaattttcccggatcgg
ttctttaacggcaacccttcaaatgacaacagcaagcagcaggcacgcggggcgcagccg
attgagcatcgcgattggtcggatttgcccgataatccgcgcctgaaaggaacgagcggc
tacgatggcgacggcgaatggtcgaatgactttttcggcggagacatcgctggaattgaa
caaaagttggattatttgcagtcgcttggggtgaacacgatttacttaaatccgatcgcc
aatgcaccatcgaaccataaatatgatgcgagcaattacaaagaattggatccgatgttc
ggttccccggaagaattccaatcgtttgtgcaggcgcttgcgaaccggggaatgcatctc
atcttagacggggtgttcaaccacgtatccgacgattcgatttactttgaccgctaccac
cgctatccgaccgtcggcgcgtatgaatattgggaagcggtttacgatttgatgaatgaa
aaaggattgagcgaggaagaagcgcggaaacaagtggaagagaagttcaaacaagaggga
cagacgttcagcccgtatgggtttcacctttggttcaatattgaaaacaaaaaagtcgat
ggccattatcaataccaatcatggtggggctatgacagtctgccggagtttaagtcggtg
acgggggaaaaagtgccgcatccgagtgaattgaacaacgatgcgctcgcgaattacatt
ttccgtgaatcggattcggtggcgaaaagctggattgcccgcggcgcctccggctggcgg
ttggatgtggccaatgaggtggatccggcgttttggcgcgagtttcgccaagaattgctt
caagggtcgtacgaccgcggtccgacgttaaaagagggggagcagccgctcattttaggg
gaaatttgggatgacgcatcgaaatattttctaggcgaccagtacgattccgtgatgaac
taccggttccgcggggcggtgcttgactttttgaaaaacggaaatgcagaagaggcggac
aagcgactgacggccataagggaagactacccaagtgaagcgttttatgcgctgatgaac
ttaatcggttcgcatgacacggcgcgggcggtctttctgcttgggaacggaacggattca
tccgagcgggtggagcttgatccgaattataatgaggaacttgggaaaaagcggctcaag
ctggcggtgattttgcagatgggatacccgggagcgccgacgatttattacggcgatgaa
gcgggagtaacaggctcaaaagacccagacaaccgccgcacgtatccgtggggcaaagaa
gatcaaaatctgttgtcccattatcagaaagtggggcacattcgccagcaccatcaatcg
ctgttggcccatggcgacatcaagacggtgtatgcacaaggggatgtatacgtatttgcc
cgccaatacgggcgtgaagcggcgctcattgccgtcaaccgcggcaatgaggacaagacg
gtggcgcttgacgtcgcttcgttgcttccgaacggcaccgtgctcacggatgagttgcat
gatggcgggaaagctacggtcgctggcggaacgttgacggtcacgattccggccctggat
ggacggatgatgtttgggacggtgacggtggaaatgccggcagcagtcagcaatttgcag
gcgagcccttcggatggccgtgtcatgttaacgtgggaaggaaatgcgtcgagataccga
atttacgagtccacgttaagaggggccggttatacgatggtgcaagagacggaaacaact
tcggctacgatcggttcgttgacgaacggaacagcctattactttgccgttgcggcggtc
gatgaaaacgggaatgaatcaccgaaggtcgaaacgaatcgcgtcgttcctcattacccg
ctgacgagcgacaatgtccagttcgtgacaacgttaagcgatgccacactggatttgtca
aagccgcagcaagtggatgtccatgtcaacatcgacaatgtgacaagcaaaggagcagct
gatgggttgcaagcggtgttgcaagtgaaaggcccgcatgacgaaacatggaaagaatac
agagcgtcctaccaaggacaagacggcgacgccaacgtgttccgggcttccttcactccg
ctcgccgcagggacgtatacgtatcgttatgcgctgacgaccaatctcggcgaggaatgg
gtgtatacagcagagaagcaagtgacgtttgcggcagacagcagcgaccaaatagcgcca
gcagacgccatcgagctgcggcagcctgcggttgaatccggacaagtgaatttatcatgg
acgtttgttgggaaaaaagatggagatgcttatttgttagccatcgagcgcaacggtgat
atcgtgcatacaaccacttcgatcggcgattcatttacagactacgatgtcgaaaacggc
accgagtacacgtatgttgtcaagttgtatgaccgcgccggcaatgttgtggagtcgaac
acggtcaaggtgacgccggacattgtgatggtgaaggtgatttttaaagtgaaagcgccg
gattatacgccgctcgatgcccgcattacgattccgaacagtctgaacggctggaacaca
ggagcgtgggagatgtcgcgcaacggtgcggtgacgcccgattggcaatttaccgtcgag
gtgcaggaaggggaaacgatcacctataagtatgtgaaaggcggatcgtgggatcaagag
gggttggccgaccatacgcgtgaggacgacaacgatgatgacgtgagctactacggctat
gggacgactggcaccgacttgaaagtgacggtccacaatgaaggaaacaatacgatgatt
gtgcaagaccgcattttgcgttggatcgatatgccagtcgtcatcgaagaggtgcaaaaa
caagggagtcaagtgacgatcaagggcaatgccattaaaaatggcgttttgacgatcaac
ggtgagcgggtgccgattgatggccggatggcattctcgtacacgtttgcgccggccagc
catcaaaaagaagtgtcgattcatattgaaccatcggctgaaagcaaaacagccattttc
aacaacgacggcggagcgattgcgaaaaacacgaaagattatgtgctgaatttagaaacg
aagcaattgagcgaagggaagttgacaacgccgccaagcaacggcgattctccgggaagc
gaaacgccgtcccatgacggaggggcaacaccaggcaacggcacctctccgggcagcggt
ggtccatcggatggcgcatcccctggggggagcgttccgccgggcggcacagctccaccg
ggaaacgaagcgcctccatccagaccgccgcaaaaaccgtctccatcgaaaccaaaagag
aaaccgagaaagccaaccactcctccaggccaagtgaaaaaagtgtactgggatggcgtg
gagttgaaaaaagggcaaatcggccgcttgacggtgcaaaagccgatcaatctatggaaa
cggacgaaggatgggcgccttgtgttcgtccgcatcttacagcctggggaagtgtaccgc
gtctacgggtatgacgcgcgcttcggcgggcagtacgcggtcggcggcgggtattacgtg
accgacatcgacacgcacattcgctacgaaacgccgtcaaaggagaagttgaagttggtg
aatggggagtaa
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