Paenibacillus sp. Y412MC10: GYMC10_0017
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Entry
GYMC10_0017 CDS
T01100
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03030
DNA replication
gym03430
Mismatch repair
gym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYMC10_0017
03430 Mismatch repair
GYMC10_0017
03440 Homologous recombination
GYMC10_0017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gym03032
]
GYMC10_0017
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_0017
Enzymes [BR:
gym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYMC10_0017
DNA replication proteins [BR:
gym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYMC10_0017
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYMC10_0017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Mg_chelatase
Pox_T4_C
Motif
Other DBs
NCBI-ProteinID:
ACX62327
UniProt:
D3E734
LinkDB
All DBs
Position
22531..23517
Genome browser
AA seq
328 aa
AA seq
DB search
MSFNDIVGQETAKQLLQNALRRNAVSHAYLFSGPNGAGQMQTALTFAKALFCTEREDDAC
GQCLECRKVEHGNHPDLTMVEPDGASIKIDQIRDLQRIFSYRSENRNPKVYIIDRAEKMT
TQAANSLLKFLEEPQAPAVAILIAENGQALLPTVQSRSQLVPFRALDPQMMEKVLVGEGY
PAALVRCAVHLASGLDECRKILNENWFAEIRNVVLQLGKESLTRSGSAMITASQKVFKTE
LSDHLDLLFSMFHLWFKDMIHVQYGRKESLVFIDQAEYISGHASARSTAQWVSYMDLAAE
CQKKLRYNVNGQLSLEQLLMGLGGNTPA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaacgatatcgtaggtcaagagactgcgaagcaactgctgcaaaatgccttg
cgccgtaatgctgtcagtcatgcctatctgtttagcggcccgaacggtgcaggacagatg
cagacggcgcttacgtttgccaaggcattgttttgtacggaacgggaagacgatgcttgc
gggcaatgtttggaatgccgcaaggtggagcacggcaaccatccggatctgacgatggtc
gagccggatggggccagcatcaagatcgatcagatccgcgatcttcagcggatattctcc
tatcgatcggagaaccggaatcccaaggtatatattattgaccgtgcggagaagatgacc
acgcaggcagccaacagcctgctgaaatttcttgaggagccgcaggcgcctgccgtcgcc
atactgattgccgagaatggacaagcccttctgcccaccgttcaatcacgatcacagcta
gtcccgttccgggcccttgatccgcagatgatggaaaaggtccttgtaggtgagggctat
cctgccgcgcttgtacgctgcgctgttcatctggcgtccggacttgacgagtgcaggaaa
atattgaatgagaattggtttgcagaaattagaaacgtagtgttacaattagggaaggag
tctttgacccgcagtggctctgcgatgatcaccgcgagtcaaaaagtgttcaaaaccgaa
ctctccgatcatctggacttattgttcagtatgtttcatttatggtttaaggacatgatc
catgtccagtatggaaggaaagagtctctcgttttcatagatcaggcagagtatatctct
ggtcatgcatcagcccgcagcacagcacagtgggtgtcatacatggatttggccgcagag
tgtcagaagaagttacgctataatgtcaatggacagctcagtttagagcagttattgatg
ggtttgggcggtaacactccggcgtga
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