Paenibacillus sp. Y412MC10: GYMC10_1158
Help
Entry
GYMC10_1158 CDS
T01100
Name
(GenBank) cell wall/surface repeat protein
Organism
gym
Paenibacillus sp. Y412MC10
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collar
SLH
Flg_new
Cadherin-like
Big_5
Big_9
Cadherin_5
Cadherin_4
Glucodextran_B
fn3
MdcG_N
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
ACX63447
UniProt:
D3EGS9
LinkDB
All DBs
Position
1365591..1369649
Genome browser
AA seq
1352 aa
AA seq
DB search
MQKRRQMASAKWLKVMLSILIGLEVVLGVFASPKTVKANLPDAQYLGEIRLFPYRDGPEG
WIYCAGQVLTINQENSPLFTLLGSNFGGDGTRTFALPDLREEEPVPGMGYYIAAEGLFPR
GSGLTSNTMLGELRLFPYYMEMNDNWVAADGTALSNSDPLYGIYGTAFGQDWQGSFKLPE
IDPVQPKIRYFAAKSGIQPSTAGAVYMGETRQFPLDIPALASFKADGKLLNVASNMALYG
LIGNAFGGSPDQTFAIPDLGVDPLTTYYVFQTGIVPVLQQVQPVSVPDQYTTAESTVLSV
PAPGVLKNDSDVMIANIVDLPAHGKITFHKNGSFTYTPDADFVGTDSFTYIASNNNKSGS
VTSVTIHVAEPEPRISGVTNGGIYNHEVTPVYTHGTGTLDGQPFASGTTIRKDGQYRLVV
ESPRGKTVKADFEIDQTAPLVSGVADGGQYDRELQIFFNEGSATLNQQAFQSGDRVNTEG
EFDLVVTDRAGNKSEVQFSIYFPKTVTFDSNGGSPVADEVVPYHTTATKPVDPVKPGYAF
GGWYMDRIFQLPFDFKTPILANLTLYAKWNDADAPVVVDRAPLHLADDVPIGTKLEFTFD
EPVTASSGKYISIMRAADHQKIESIDVTDSSRVSVIDEKVAVSLTRQLSYLTRYYIQIED
GAFQDTAGNLYAGMKGPGDWNFTTEAGPVAAPLAPANLTATAGDGEVTLLWSTVTGATYY
DIYSGTESGVYGSSPIATVTGSTYSAGNLLNGTTYYFAVKAGNVGGSSAFSEEVSARPAG
AEIPVPGDADLSGLALSHGTLAPAFNPAVTSYISHVGNRITEIRITPSVSDPQATVTING
KAVSAGQASDSISLAVGSNTIHLMVTAQNGAAKTYTVDVTREAAASPEPEPEPGNPSNPG
TPGGGSGSSEGQGPGVSGSSQAGQGAGSGKSPTGSSHVTSYFNDVLQTGLILSEITKKNG
QTVLTVKMNGDRLQSLLAQEKNSRPIVRLRATEGLDQAVVVLDGKSAKALEASGAMIAFE
TLAGSVRIPVQAISEQIGSLAGTKEGTIQLGLADGNAAISAKLKQVGNGKYFGEHYGSID
VSVAAYDQGKRLSGNTYSSYVELEVPVAEGSAAIVTTAVLLDDQGKVHHAPTRLVTREGR
TYAIIKGLYSGTYALISHDEELSDMKGHWAGAAVNEMASRLLVGGRGAAGFHPNEPVTRA
EFVTMMVRSLGLTEQSNTSTFQDVTSRDWYVGAVSAASGSGLIHGYADGTFLPNGLISRQ
EAMVIFARALKFAEVSPMVEAMDSEAVLAAFQDRAELASWAKAAAAEVVHSGLMSGYDAK
LRPRSDMTRAETATILLRMLSASGMIGDMPSK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacgaaggcagatggcatccgcgaaatggttgaaggtgatgttgtccattcta
ataggtttggaggttgtactgggtgtgttcgcatctccgaagacggttaaggctaatctt
ccagacgctcaatatctgggggagatccgtctatttccttaccgggatggtcccgaaggg
tggatatactgtgcagggcaggtgttaacgataaatcaggaaaattcgcctttgtttact
ctactgggcagcaactttggcggggatggcacaaggacgtttgcattgcctgatttacgg
gaggaagaaccggtaccgggcatgggatactatatcgcggctgagggattatttccgaga
ggcagtggattgacctccaatacgatgctgggagagcttcggctctttccctactatatg
gagatgaatgataactgggtcgcggctgacgggaccgctttaagcaattctgaccctctg
tacggcatctacggcactgcattcggccaagactggcagggcagctttaaattgccggag
attgaccctgtgcagcccaagatccggtatttcgccgccaagtccgggatccaacccagt
acggctggtgccgtatacatgggcgagacacgtcagtttcctctggatatccctgccctc
gcttcctttaaggcggacggtaaactgctgaatgttgcctcgaacatggcgctgtacggc
ttaatcggcaacgctttcgggggatcgccggatcaaacgtttgcgattcccgatcttgga
gtcgatccgctgacaacgtattatgtattccaaacgggaatcgttcctgtcttgcagcag
gttcagcccgttagcgtgccggatcaatacacgacggcggagtccaccgtattaagcgtt
cctgcaccgggtgttctgaaaaatgattccgatgtcatgatcgccaacatcgtggatctg
cctgctcatggaaagataacatttcataagaatggctcctttacctatacgccggatgcc
gattttgttggcacagattcttttacatatatcgctagcaataataacaagagcggcagc
gtaaccagcgttaccatccacgtggcagagcctgaaccccggataagcggagtaaccaat
ggaggaatttataatcacgaagtgacgcctgtttatacccatggcacgggaacgctggac
gggcagccctttgccagcggtacgaccatccgcaaggatggccagtatagactggtcgtc
gagtcgcctcgcggaaaaacggtcaaggccgattttgagatcgaccaaaccgcgcctctg
gtttcaggcgtggcagatggaggccaatacgatcgggagctgcaaatcttcttcaatgaa
gggagcgcaacgctcaatcagcaagcgtttcaaagcggagacagggttaacacggaaggg
gaattcgatctcgtcgtaaccgaccgtgcagggaataagtctgaggttcaattctcgatc
tatttccctaaaaccgtgacgttcgacagcaacgggggttctcccgtggcagatgaggtc
gtcccttatcatacaacagcaacgaagcccgttgatccggtaaaacccggttatgccttc
ggagggtggtatatggatcgaatctttcagcttccatttgattttaagacacccattctg
gctaacctgacgctgtatgccaaatggaatgatgcggatgcgcctgtcgtggtcgatcgg
gctcctctgcatctggcggatgacgtgccgatcgggacgaaacttgaattcacgttcgat
gaacccgtaaccgcaagcagcggcaaatacatatcgattatgagagcggcggaccatcaa
aagatcgagtcgatcgacgtaaccgatagctcccgcgtcagcgtgatcgacgagaaggtt
gcggtaagtctgacgcgacagctgtcgtatcttacgcgttattacatccaaatagaggat
ggcgcatttcaggatacagcaggcaacctctatgcaggcatgaagggccctggagattgg
aactttacaacggaggctgggcctgtcgcagcaccgttagcacctgcaaatttgacggct
actgcaggagatggtgaggtgaccttactgtggtccaccgttacgggtgcgacttattac
gatatttattccgggacggagtccggcgtatacgggagctcaccgatcgcaacggttacg
ggttcgacgtattcggcagggaatttactgaacggaacgacttattattttgcggtgaaa
gccggtaacgtcgggggttccagcgcattttcggaagaggtgagcgcaagaccggccggt
gccgagatacccgttccgggcgatgcggatttaagcggattagcattatcgcatggaacg
cttgctccggcattcaaccctgctgtcaccagctacattagccatgttggaaaccgtata
acggagatccgcataacgccgagcgtttccgatcctcaggcaacggtgacgataaacggt
aaggctgtctccgccggacaggcatcagattcgatcagcctagcggtaggaagcaacacc
attcatcttatggttacggctcagaacggagctgcgaaaacttacacggtggatgtgacc
agagaggcagccgcttctcctgaacctgaacctgaacccggaaatccttccaatccgggg
acgccggggggcggatcaggatcttcggaaggtcaaggacctggcgtaagcgggagttct
caagcaggtcaaggggcaggctcagggaagagcccgacaggcagcagccacgtcacgtcg
tatttcaatgatgtattgcagaccggcttgatattatcggagataacgaaaaagaatgga
cagaccgtgctgaccgtcaagatgaacggagacaggctccaatcgctgctggcacaggag
aagaacagccgaccgatcgtccggctgcgcgccacggaggggcttgatcaagccgtggtg
gttctggatggcaaatcagccaaagcgcttgaagcaagcggagcgatgattgcattcgag
accttggcaggcagcgtccgtattccggttcaagccatttccgaacagatcggcagtctt
gccggaacgaaggaaggcacgattcaacttgggctagccgatggcaacgccgcgatcagc
gcaaagctgaagcaggtcgggaacgggaagtattttggtgaacattatggctccatagac
gttagcgtcgcagcctatgatcaaggaaaacggctgagcggaaatacctattcctcttat
gtggagctggaagttcccgtggcagaggggtcagctgccatcgtgacaacggccgtcctg
ctggatgatcaagggaaggttcatcacgcaccaacccggctggttacgagggaaggccgt
acttacgccataataaaaggtttatacagcgggacgtatgctttaatcagccacgacgaa
gaattatcggatatgaaaggccattgggccggggcggcggtgaacgagatggcgtcacgc
cttctcgttggcggcagaggcgccgccggattccatccgaatgaaccggtaacccgtgct
gaattcgtcaccatgatggtacgctcgctcggtttaacggagcaaagcaatacaagcacg
tttcaagatgtaacttcccgggactggtatgtgggggccgtatcggcggcaagcggaagc
ggactcatacacggttatgccgacgggacctttttgccgaatggcttgatctccagacag
gaggcgatggttattttcgcaagagcgttaaagttcgctgaggtttccccaatggtagag
gccatggattcggaggctgtgctggctgctttccaagaccgtgccgaattggctagttgg
gccaaggcggctgcagccgaagtggttcacagcggactcatgagcggttacgatgccaag
ctgagaccgcggagtgatatgaccagggcggaaacggcaacgattcttctacggatgcta
tccgcatcggggatgatcggagatatgccgtctaaataa
DBGET
integrated database retrieval system
