Paenibacillus sp. Y412MC10: GYMC10_1812
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Entry
GYMC10_1812 CDS
T01100
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00300
Lysine biosynthesis
gym00550
Peptidoglycan biosynthesis
gym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GYMC10_1812
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYMC10_1812
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
GYMC10_1812
Enzymes [BR:
gym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GYMC10_1812
Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
Precursor biosynthesis
Amino acid ligase
GYMC10_1812
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RraA-like
DUF1611
LpxD
Motif
Other DBs
NCBI-ProteinID:
ACX64095
UniProt:
D3E568
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Position
2134506..2135990
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AA seq
494 aa
AA seq
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MNLKQLSSVLAAAVIEGSGDVEITGIETDSRQVKPGDLFICLPGHTVDGHQFAAQAAGKG
AAALVVERKLEVDLPQVIVKDSRFAMAGLANAFYHQPSSRMKMIGVTGTNGKTTTTYLIE
TIMNDFGLKTGLIGTIQMKYGGQSFPMPRTTPEALELQRYLNDMANAGTECCVMEVSSHA
LEQGRVKGTDFRTAIFTNLTQDHLDYHHTMEEYRGAKGLFFSRLGNAFAKDESARKYAVL
NADDDASAYFAKQTAAEVITYGLGEDADVRASNISITAQGTSFHVDTFRGSADISIRMVG
KFNVYNAMAAIAAALLEGVPLEDIKNSLESVPGVDGRVEVVDEGQPYAVIVDYAHTPDGL
ENVLRTVNEFAEGRVLTVFGCGGDRDRTKRPIMGKIAAKYSDVVFVTSDNPRTEDPELIL
KDIEAGLVEDGVATESYKLIVDRRKAIEKAIEMASPGDVVLIAGKGHETYQLIAGEVLDF
DDRIVAKDAIRGRQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaagcaattatcatccgtattggccgctgctgttatcgagggatccggagat
gttgaaattacggggatagaaacagactcaagacaagtaaaaccgggggatttgttcatt
tgcctgccgggccatacggtggatggacaccagtttgcagcccaggccgccggcaaaggc
gccgcggcgctggtcgttgaacgcaagctggaggttgacctcccgcaggtgatcgtgaaa
gacagccgcttcgcgatggcgggtttggcgaatgccttttatcatcagccgagctcccgc
atgaagatgatcggcgtaaccggtacgaacggcaagacaacgacaacgtatttgatcgag
acgatcatgaacgatttcgggttgaaaaccggattgatcggcacgattcagatgaaatac
ggcggccagtccttcccgatgccgagaacgacgcccgaggcgctggagcttcagcgttac
ttgaacgatatggccaatgcaggcaccgagtgctgcgtgatggaggtatcctcgcatgcg
ctcgaacaggggcgcgtgaagggaacggatttccggacggccatcttcacgaacctgacc
caggaccatctggactatcatcacacgatggaagaataccgcggcgcaaaagggttattt
ttctcccggctgggcaacgcttttgccaaggatgaatccgcgcgcaaatatgccgtcctg
aatgcggatgacgatgcttcggcatatttcgccaagcagaccgcggcggaagtgattacc
tacggtttgggtgaagatgcggatgtgcgggcgagcaatatatcgatcaccgcgcaaggc
acctcgttccatgtggatacgttccgcggcagtgcggacatttcgattcgaatggtaggg
aaattcaacgtgtataacgccatggctgcgatcgcggcagcgctcctggaaggtgtgccg
ctcgaagatatcaagaacagcctggaatccgttcccggagtcgatggccgcgtagaggtc
gtggatgaaggccagccgtatgccgtgatcgtggattatgcccatacgccggacggactt
gaaaatgtgctccgcaccgtcaatgaattcgcggaaggccgggtgctcaccgttttcggc
tgcgggggcgaccgggaccggaccaaacggccgatcatgggtaaaatcgctgcgaaatac
agcgacgttgtattcgtaacttccgataatccccgtaccgaggatccggagttgatattg
aaggatatcgaggccggattggttgaggacggtgtggcaaccgaaagctacaagctcatc
gtcgatcgccggaaagcgatcgaaaaggctattgaaatggcaagcccgggcgatgtagta
ttgattgcggggaaaggtcatgagacctatcagctgattgcgggcgaagtgcttgatttt
gacgaccgcatcgtagccaaagacgcgataaggggcagacaatag
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