Halocatena salina: MW046_12440
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Entry
MW046_12440 CDS
T08090
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
haad
Halocatena salina
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haad03000
]
MW046_12440
Transcription factors [BR:
haad03000
]
Prokaryotic type
Helix-turn-helix
Other families
MW046_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
HTH_5
HTH_IclR
MarR
DUF2280
HTH_24
MarR_2
ABC_tran_CTD
HTH_20
Rrf2
Motif
Other DBs
NCBI-ProteinID:
UPM42753
UniProt:
A0A8U0A485
LinkDB
All DBs
Position
complement(2423408..2424478)
Genome browser
AA seq
356 aa
AA seq
DB search
METDELIAVLEDAGLSPYQADAYATLLERGSAAASEIASTSGVPQPRIYDVLRALEEQGY
VTVYDRDRLYARANSPNDALAGLKTAVQRYEAAIEEIETRYQEPEVTDSNVSLVQQLRTV
FDHARDAIETAHDHIQVAATPSRFRALQPLLAEAYDRGVHVHLSLYSPADEALPFDRAAF
EGVCTEVRRRELSGPFLVLVDREQACYATTDRLTQEYGVLVDDYTTAYVFHWYYLTRLWE
VYETIYTDRNDQPPYSFVEITECIRALEPLLEGKERITGRIRGIVTESGRECQLTGEFIA
VNYTGSQTDTEGTSLVKLAAEAQIHFQTEETVYTVGGRGAHREDIAGKRFTVDRID
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgacgaactgatcgccgtcctcgaagatgctgggctgtctccatatcaagcg
gacgcgtacgcaaccctactggagcggggatctgcggccgcgagtgagatcgcatcgacg
agcggggttccacaacctcgaatttacgacgtgctccgcgcgcttgaggagcaaggatac
gtcacggtgtacgaccgtgatcggctgtacgctcgggcaaacagtccgaacgacgctctt
gccggactcaaaacggccgtccagcggtacgaagctgcgatcgaggagatcgaaacacgg
tatcaggaaccggaagttaccgatagtaacgtgagcctggtccagcagttacgaacggtg
ttcgaccatgcccgtgacgccatcgagacggcccacgatcacattcaggtggcagctacg
cccagccgattcagggcactgcagccgctgctggcggaggcctacgaccgtggtgttcat
gtgcatctctcgctctactcgcccgccgacgaagcgcttccgttcgacagagccgcgttc
gagggcgtctgcaccgaagtccggcgacgcgaactctccggtccgttcctcgtgttagtc
gaccgggaacaggcgtgttacgcgacgacggaccggctgacccaagaatacggcgtcctc
gtggacgattacacgacggcgtacgtttttcactggtattacctgacacggctttgggag
gtgtacgagacgatttacaccgatcggaacgatcagcccccatactcgttcgtcgagatc
accgaatgcattcgtgccctcgaacccctcctcgaagggaaagaacgaataacgggacgg
attcgtgggatcgtcaccgagtccggccgggagtgccagctcacgggagagttcatcgcc
gtgaactacacagggtctcagaccgatacggagggtacatccctcgtgaaactcgctgct
gaggcacagatccacttccaaacggaagagaccgtctacactgtcggcggacgtggtgca
caccgagaagacatcgctggcaaacgattcacggtcgatcggatcgattga
DBGET
integrated database retrieval system
