Halorhabdus sp. BNX81: HBNXHr_0436
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Entry
HBNXHr_0436 CDS
T09448
Symbol
gtpbp1
Name
(GenBank) GTPase
KO
K03231
elongation factor 1-alpha
Organism
habn
Halorhabdus sp. BNX81
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
habn03019
]
HBNXHr_0436 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
habn03016
]
HBNXHr_0436 (gtpbp1)
03012 Translation factors [BR:
habn03012
]
HBNXHr_0436 (gtpbp1)
04131 Membrane trafficking [BR:
habn04131
]
HBNXHr_0436 (gtpbp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
habn04147
]
HBNXHr_0436 (gtpbp1)
Messenger RNA biogenesis [BR:
habn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HBNXHr_0436 (gtpbp1)
Transfer RNA biogenesis [BR:
habn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
HBNXHr_0436 (gtpbp1)
Translation factors [BR:
habn03012
]
Eukaryotic type
Elongation factors
HBNXHr_0436 (gtpbp1)
Membrane trafficking [BR:
habn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
HBNXHr_0436 (gtpbp1)
Exosome [BR:
habn04147
]
Exosomal proteins
Proteins found in most exosomes
HBNXHr_0436 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
MeaB
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
WEL20511
LinkDB
All DBs
Position
446770..448407
Genome browser
AA seq
545 aa
AA seq
DB search
MTPDRAVLERAIERGEREGGSVEFKERLTRDTHLVDGRLESLAAQLRHRVLSGDGEATYV
VGITDDGNLAGIDPEAFSESMDVLSLLADEAGAHIEDVETWGVDGEGNAVRGQSGERGIA
GVATIREGAVMDDDEHIVVGTAGHVDHGKSTLVGSLVTGQADDGQGGTRSYMDIRPHEVE
RGLSADLSYGVYGFDDDGPVRMDNPDRKTDRARIVEEADRLVSFVDTVGHEPWLRTTIRG
LVGQKLDYGLLTVAADDGPTKTTREHLGILLATELPTIVAITKADLVDADRIATVEREVE
RLLRDVEKTPLPVERHGVDAAIEEISETVVPVVTTSAVTGDGLDTLDELFERLPKTGGDE
TAQFRMYVDRSYNVTGVGAVASGTINAGRVEAGDELLLGPMADGTFREVEARSIEMHYHR
VDEGRAGRIVGIALKGVEEQDVERGMVLLPREADPQPVREFEAEVMVLNHPTRIGEGYEP
VVHLETISEAAAFYPEGGQLLPGDSGRARVRFKFRPYLVEEGQRFVFREGRSKGVGTVTD
VTGVE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgaccgggccgtcctcgaacgcgcgatcgagcgcggcgagcgcgagggcggc
agcgtcgagttcaaggaacgcctgactcgcgatacgcacctcgtcgacggtcgcctcgaa
agtctggccgcccagcttcgccaccgcgtcctcagcggcgacggcgaggcgacctacgtt
gtggggatcaccgacgacgggaacctggctggtatcgaccccgaggcgttctccgaatcg
atggacgtcctctcgctgctcgccgacgaagccggggcgcacatcgaggacgtcgagacc
tggggggtcgacggggagggcaatgccgtccgtggccagtccggcgagcgcgggatcgcc
ggtgtggcgacgatccgggagggcgcggtcatggacgacgacgagcacatcgttgtcggg
accgccggccacgtcgaccacggcaagagcaccctcgtcggctcgctcgtaacgggccag
gccgacgacggccagggcgggacgcgctcgtacatggatattcgcccccacgaggtcgag
cgcggcctctccgccgatctttcgtatggcgtctacggcttcgacgacgacggccccgtc
cggatggacaaccccgaccggaagaccgaccgcgcacggatcgtcgaggaggccgaccgc
ctcgtgagcttcgtcgatacggtcggccacgagccctggctccggaccacgatccgcggg
ctcgtcggccagaagctcgattacggcctgttgacggttgctgccgacgatgggcccacc
aagacgacccgcgaacacctgggcatcctgctggcgaccgaactgccgacgatcgtcgcc
atcacgaaggccgatctcgtcgacgccgaccggatcgccacagtcgagcgtgaggtcgag
cgcctgctgcgggacgtcgagaagacaccgctgccggtcgagcgccacggcgtcgacgcc
gcgatcgaggagatctcagagaccgtcgtccccgtggtgacgaccagcgccgtcacgggc
gatggactcgacaccttagacgaactcttcgagcgactccccaagaccggtggcgacgag
accgcgcagttccggatgtacgtcgaccgctcctacaacgtcaccggcgtcggcgcggtc
gcctcggggacgatcaacgccggccgcgtcgaggccggtgacgaactcctgctggggccg
atggccgatggcaccttccgcgaagtcgaggcccgctctatcgagatgcactaccaccgc
gtcgacgagggccgtgccggtcggatcgtcggtatcgcgctgaaaggcgtcgaagaacag
gacgtcgaacgcgggatggtcctcctgccccgcgaagccgatccccaaccggtccgggag
ttcgaggccgaggtgatggtgctcaaccacccgacgcggatcggcgagggctacgaaccc
gtggtgcacttagagacaatcagcgaggccgccgcgttctatcccgagggcggccagcta
cttccgggcgacagcgggcgggcgcgcgttcggttcaagttccggccgtatctggtcgag
gaaggccagcgcttcgtcttccgggaggggcgctcgaagggcgtcggcacggtgacggac
gtgacaggcgtggagtga
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integrated database retrieval system
