Haloplanus aerogenes: DU502_01185
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Entry
DU502_01185 CDS
T05732
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
haer
Haloplanus aerogenes
Pathway
haer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DU502_01185 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haer03400
]
DU502_01185 (uvrB)
DNA repair and recombination proteins [BR:
haer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DU502_01185 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DU502_01185 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
DUF87
AAA_30
HEM4
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AZH24070
UniProt:
A0A3G8QPC1
LinkDB
All DBs
Position
230255..232315
Genome browser
AA seq
686 aa
AA seq
DB search
MSDANSGPLQPDRPDADQPFRVDAPFDPAGDQPDAIEELVAGYEAGMDEQTLLGVTGSGK
TNTVSWVIEELQQPTLVIAHNKTLAAQLYEEFRNLFPDNAVEYFVSYYDYYQPEAYVEQT
DTFIDKDASINDEIDRLRHSATRSLLTRNDVIVVASVSAIYGLGDPANYVDMALRLERGQ
EIGRDDLLARLVDLNYDRNDVDFTQGTFRVRGDTVEVFPMYGRYAVRVEFWGDEIDRLTK
LDPLEGEVKSQEPAVLIHPAEHYSIPEERLENAIEEIEVLMEDRVAYFERQGDLVAAQRI
EERTTFDIEMLRETGYCSGIENYSVHLSDRESGEAPYTLLDYFPDDFLTVVDESHQTLPQ
IKGQYEGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEEKTNRMLYVSATPGDYEQEHSDQ
VVEQIVRPTYLVDPAVEVADATGQVEDLMDRIDERIERDERILVTTLTKRMAEDLTEYLS
EAGVAVEYMHDETDTLERHELIRGLRLGDFDVLVGINLLREGLDIPEVSLVAILDADQEG
FLRSETTLVQTMGRAARNVNGEVVLYADDVTDSMQSAIDETRRRRRIQQEFNEEHGHEPT
TIEKAVGETNLPGSETDTSGVTGDTPETEDEARERIEALEERMQAAADNLEFELAADIRD
RIRDLRQEFEFDDADDGIAPELDSEF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgccaactcgggcccgctccagccggaccgccccgacgccgaccagccgttc
cgggtcgacgcccccttcgacccggcgggcgatcagcccgacgcaatcgaggaactcgtc
gccggctacgaggccggaatggacgagcagacgctcctcggcgtcaccggctcgggcaag
accaacaccgtctcgtgggtgatcgaggaactccagcagccgacgctggtcatcgcccac
aacaagacgctggccgcccagctatacgaggagtttcgaaacctcttccccgacaacgcg
gtcgagtacttcgtctcttactacgactactaccagcccgaggcgtacgtcgaacagacg
gacacgttcatcgacaaggacgcctcgatcaacgacgagatcgaccgcctgcgccactcc
gcgacccgttccctgttgacccgaaacgacgtgatcgtcgtcgccagcgtctcggccatc
tacggcctcggtgaccccgccaactacgtcgacatggcgctccgcctcgaacggggtcag
gagatcggccgcgacgacctgctcgcccggctggtcgacctcaactacgaccgcaacgac
gtggacttcacgcagggcaccttccgcgtccgcggcgacaccgtcgaagtgttcccgatg
tacggtcgctacgccgtccgcgtggagttctggggcgacgaaatcgaccgtctgaccaaa
ctcgatccgctggaaggggaggtaaagagtcaggaacccgccgtgttgatccacccggca
gaacactactccatccccgaggagcgactggagaacgctatcgaggagatagaggtgctg
atggaggaccgcgtggcctacttcgagcgacagggggatctggtcgccgcccagcggatc
gaggagcgcaccaccttcgacatcgagatgctgcgcgagacggggtactgctcgggcatc
gagaactactccgtccacctctcggaccgggagtccggcgaggcgccctacaccctgctc
gattacttccccgacgacttcctcacggtcgtcgacgagtcccaccagaccctcccccag
atcaagggacagtacgagggcgacaagtcccgcaaggactcgctggtcgagaacggcttt
cggctccccaccgcgtacgacaaccgcccgctcaccttcgaggagttcgaggagaagacg
aaccggatgctgtacgtctccgcgacccccggcgactacgagcaggaacactccgatcag
gtggtcgaacagatcgttcggcccacctatctcgtcgaccccgcggtcgaggttgcggac
gcgacggggcaggtcgaggacctcatggaccgcatcgacgaacgcatcgaacgcgacgag
cgcatcctcgtgacgacgctcaccaagcggatggccgaagatttgaccgaatatctctca
gaggccggcgtcgccgtcgagtatatgcacgacgagacggacacgctggagcgccacgag
ttgatccgcggtctccggttgggtgacttcgacgtactcgtcggcatcaacctcctccgg
gaggggctggacatccccgaagtctccttggtcgccatcctcgacgccgatcaggagggg
ttcctccggtcggagacgacgctcgtccagacgatgggccgggcggcgcgcaacgtcaac
ggcgaggtggtgctctacgccgacgacgtgacggactcgatgcagtcggctatcgacgag
acgcggcggcgccggcgcatccagcaggagttcaacgaggaacacggccacgaaccgacg
accatcgagaaggcggtgggtgagacgaacctgccggggagcgagacggacacctcgggc
gtcacgggcgacacccccgagaccgaggacgaggcccgtgaacggatcgaggcgctggaa
gaacggatgcaggccgccgccgacaatctggagttcgaactcgcggccgacatccgcgac
cggattcgtgacctgcgacaggagttcgagttcgacgacgccgacgacggcatcgcgccc
gaactcgattcagagttctga
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