KEGG   Haloplanus aerogenes: DU502_10850
Entry
DU502_10850       CDS       T05732                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
haer  Haloplanus aerogenes
Pathway
haer03030  DNA replication
haer03410  Base excision repair
haer03420  Nucleotide excision repair
haer03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU502_10850
   03410 Base excision repair
    DU502_10850
   03420 Nucleotide excision repair
    DU502_10850
   03430 Mismatch repair
    DU502_10850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haer03032]
    DU502_10850
   03400 DNA repair and recombination proteins [BR:haer03400]
    DU502_10850
Enzymes [BR:haer01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DU502_10850
    6.5.1.6  DNA ligase (ATP or NAD+)
     DU502_10850
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DU502_10850
DNA replication proteins [BR:haer03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DU502_10850
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DU502_10850
DNA repair and recombination proteins [BR:haer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DU502_10850
   NER (nucleotide excision repair)
    Other NER factors
     DU502_10850
   MMR (mismatch excision repair)
    Other MMR factors
     DU502_10850
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Sigma70_r3
Other DBs
NCBI-ProteinID: AZH25843
UniProt: A0A3G8QTG7
LinkDB
Position
complement(2126046..2127698)
AA seq 550 aa
MDFADFADRVDAIEAESADLAITSLVADLFVDAGADLPVVARLLLGRVFPAWDSTTLDVG
PNLCHEALARAAGPNVTADDVAATLADAGEIGAVAESLDLGGQQGLAAFGAAEPDPLTVA
EVDDRLRDLAAAEGAGSRDHKVDVLFGLFNRTDPVAARYLARLVLSEMRIGVGEGTVRDA
IAEAFDVPADDVERALQVTNDYGSMAVRACDEGEAGLAAAELAVGRPVQAMLAQTGTAAD
AVEAWESVAVETKFDGARVQIHHDPADETRVFSRNLEDVTDALPEIVEFVADLDVPVILD
GEAIAVDDAGDPLPFQEVLRRFRRKHDVARMREEVTVEFRAFDCLHVDGTDLLDAPLLDR
RERLSSVLSDGLSPLTVAEDVETIADHEATALDAGHEGIMLKNPESAYTPGKRGQNWLKR
KPDVETLDLVVTGAEWGEGRRANHLGTFLLSARDEDEFATIGKVATGITDERLAELSDRL
EPLIRNQEGTEVDIEPEVVFEVGYEEIQASSTYGSGHALRFPRFVAVREDKTPSEADSLS
RIERLVDEHE
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggatttcgccgacttcgccgaccgcgtcgacgccatcgaggccgaatctgccgacctc
gcgatcacatcgctggtcgcggacctattcgtcgacgctggcgccgaccttcccgtggtc
gcccgactgttgctcgggcgggtcttccccgcgtgggactcgacgaccctcgacgtcgga
ccgaacctctgtcacgaggcgctcgcccgcgccgccgggccgaacgtcaccgccgacgac
gtggcggcgacgctggccgacgctggcgagatcggtgcagtcgccgagtcgctggatctc
ggcggccaacagggcctggccgcgttcggcgccgccgagcccgatccgctgaccgtcgcc
gaggtggacgaccgcctgcgggacctcgccgccgccgagggggcagggagtcgcgaccac
aaggtcgacgtgctcttcggcctgttcaaccggaccgatccggtcgcggcgcgctatctc
gcccgactcgtcctctcggagatgcggatcggggtcggcgagggcaccgtccgcgacgcg
attgccgaggcgttcgacgtgccggccgacgacgtcgaacgcgccctacaggtcaccaac
gattacggatcgatggccgtccgcgcctgcgacgagggggaagcggggctggcggcggcc
gaactcgccgttggccgaccggtgcaagcgatgctcgcccagaccgggacggccgccgac
gccgtcgaagcgtgggagtcggtcgccgtcgagaccaaattcgacggcgcacgggtgcag
atccaccacgacccggctgacgagacccgcgtgttctcccggaatctggaggacgtgacc
gacgccctgccggagatcgtcgagttcgtggccgacctcgacgtgcccgtcatcctcgac
ggtgaagccatcgccgtcgacgacgcgggcgatccgctcccctttcaggaggtactccgg
cgattccgccggaaacacgacgtggcgcggatgcgcgaggaggtgaccgtcgagttccga
gcgttcgactgccttcacgtcgacgggacggatctgctcgatgcgccgcttctcgaccgg
cgggagcggctgtcgtcggtgttgtcggacggactctcgccgctcacggtcgccgaggac
gtggagaccatcgccgaccacgaggcgacggccctcgacgcgggccacgaggggatcatg
ctcaagaatcccgagtcggcgtacacgccgggcaagcgtgggcagaactggctgaaacgc
aagccggacgtggagacgctggacctggtcgtcacgggtgcggagtggggtgaggggcgc
cgggcgaaccacctcggtacgtttctgttgtcggcgcgggacgaggacgagttcgcgacc
atcggcaaggtggcgacgggcatcaccgacgagcgactggccgagttgagcgaccgcctc
gaaccgctgatccggaaccaggagggcaccgaagtcgatatcgagccggaagtcgtcttc
gaggtggggtacgaggagattcaggcgtcgtccacctacggctcggggcacgcgctccga
ttcccgcggttcgtcgccgttcgggaggacaagacgccgagcgaggccgattcgctgtct
cggatcgagcgtctcgtcgatgagcacgaatag

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