Hipposideros armiger (great roundleaf bat): 109390993
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Entry
109390993 CDS
T04661
Symbol
LIG1
Name
(RefSeq) DNA ligase 1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai03030
DNA replication
hai03410
Base excision repair
hai03420
Nucleotide excision repair
hai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109390993 (LIG1)
03410 Base excision repair
109390993 (LIG1)
03420 Nucleotide excision repair
109390993 (LIG1)
03430 Mismatch repair
109390993 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hai03032
]
109390993 (LIG1)
03400 DNA repair and recombination proteins [BR:
hai03400
]
109390993 (LIG1)
Enzymes [BR:
hai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
109390993 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
109390993 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
109390993 (LIG1)
DNA replication proteins [BR:
hai03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
109390993 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
109390993 (LIG1)
DNA repair and recombination proteins [BR:
hai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
109390993 (LIG1)
NER (nucleotide excision repair)
Other NER factors
109390993 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
109390993 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
PucR
DDR
Motif
Other DBs
NCBI-GeneID:
109390993
NCBI-ProteinID:
XP_019513696
EnsemblRapid:
ENSHARG00000011839
UniProt:
A0A8B7SJZ3
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
SSPSPMRISPSGIPKRRTARKQLSKRTIHDVLEEKSEDKNGEANKAVPREVWDGGWVRHV
MCVSFPRVPYLAVARTFEKIEEVSARLRIVETLSNLLRSVVALSPPDLLTILYLSLNHLG
PPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPAL
TASGVFAKFQDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARALSGRLRLGLAEQSV
LAALAQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMVLKQTFCEVPDLDRIVPV
LLEHGLERLPAHCSLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVL
EGGEVKVFSRNQEDNTGKYPDVISRIPKIKRPSVTSFILDTEAVAWDREKKQIQPFQVLT
TRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSL
DTKDTDQIAEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDL
VVIGAYLGRGKRAGRYGSFLLASYDEESEELQAICKLGAGFSDEELEQHHQSLQALVLPT
PRSYVRADGAVAPDYWLEPSAVWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRIR
EDKKPEEATTSAQVAGLYRKQSQIQNQQSADLDSDLEDFY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
tctagtccctctccaatgcgcatctccccatcagggatcccgaagcgtcgcacagctcgg
aagcagctgtctaaacggacaattcacgatgttctggaagagaagagtgaggacaagaat
ggagaagccaacaaggctgtccctagggaggtgtgggatggcggctgggtaaggcacgtc
atgtgtgtctctttccctagggtcccttatctggctgtggcccggacctttgagaagatc
gaggaggtttctgctcggctccggatagtggagacgctgagcaacttgctgcgctctgtg
gtggccctgtcacctccagacctcctcaccatcctctaccttagcctcaaccaccttggg
ccgccccagcagggcctggagcttggtgtcggggacggcgtccttctcaaggcagtggcc
caggccacaggtcggcagctcgagtctgtccgggctgaggcagccgaaaagggcgacgtg
gggctggtcgctgagaacagccgcagcacccagagactcatgctgcccccgcccgccctc
accgcctctggggtcttcgccaaattccaagacattgcccggctcactggcagcgcttcc
acagccaagaaaatagacatcatcaaaggcctgtttgttgcctgccgccactcagaagcc
cgatttattgccagagccctgagtggacggctgcgcctcggtctggcagagcagtcggtg
ctggctgccctcgctcaggctgtgagcctcacacccccaggccaagaattccccccagcc
atggtggatgctgggaagggcaagacagcagaggccagaaagacgtggctggaggagcaa
ggcatggtcctgaagcagacattctgtgaggtacctgacctggaccggattgtccccgtg
ctgctggagcatggcctggagcggctcccggcgcactgcagtctgagtccaggggtcccc
ctgaaaccaatgttggctcacccgacccggggcgtcagcgaggtcctgaaacgctttgag
gaggcagctttcacctgcgagtacaaatacgatgggcagagggcacagattcatgtttta
gaaggcggggaggtgaaagtcttcagcaggaatcaggaagacaatactggaaagtacccc
gacgtcatcagccgcatccccaagattaaacgtccgtcagtcacatcctttatcctggac
actgaagccgtggcttgggaccgggagaagaagcagatccagccatttcaagtgctcacc
acccgcaaacgcaaggaggtggatgcagccgagatccaggtgcaggtgtgtttgtatgcc
ttcgacctcatctacctcaatggagagtctctggtacgtgagcccctttcccgacgccgg
cagctgctccgggagaacttcgtggaaacggagggcgagtttgtcttcgccacgtccctg
gacaccaaggacacagaccagatcgccgagttcttggagcagtctgtgagagactcctgc
gaggggctgatggtgaaaaccctggatgtcgatgccacctacgagatcgccaagagatca
cacaactggctcaagctgaagaaggactatctggacggtgtgggtgacacccttgacctc
gtggtgatcggcgcctacctgggccgggggaagcgggctggccgctatgggagcttcctg
ctggcctcctatgatgaggaaagcgaggagctgcaggccatttgcaagcttggagctggc
ttcagtgacgaggagctggagcagcatcaccagagcctgcaggccctggtgctgcccacc
ccacgctcctatgtccgggcagacggtgccgtggcccccgactactggctggagcccagc
gccgtgtgggaggtcaagtgtgctgatctctccctctcccccatctaccctgccgcccgg
ggcctggtggacagcgagaaggggatctccctacgcttccctcggtttattcgcatccgt
gaagacaagaagccggaggaggccaccaccagtgcccaggtggccggactgtacaggaag
caaagtcagattcagaaccagcagagtgctgacttagattccgacctggaggatttctac
tag
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