Haloplanus rubicundus CBA1113: DU500_03700
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Entry
DU500_03700 CDS
T05613
Name
(GenBank) endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
haj
Haloplanus rubicundus CBA1113
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haj03016
]
DU500_03700
Enzymes [BR:
haj01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DU500_03700
Transfer RNA biogenesis [BR:
haj03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
DU500_03700
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
AXG05612
UniProt:
A0A345E090
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All DBs
Position
751764..752807
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AA seq
347 aa
AA seq
DB search
MQGTFEGGTVRVGGDARQRFYDARGYGRPLDGNRIELAPVEAAHLLFRGDLDGVVGPDGE
TMAFRAFLTAADAVLTFVVYKDLRDRGFYLSPTREGWVDDPAGADLVVYPRGKGPADDEV
AHRVRVAGEREEILAADLGDVVLAVVDEEGELTYFETERIGAAGDADAEIDRYDPPTDLD
AALLADRAVVWDPPADLHDRGFYGQRLHGRNAESGPLQLSLVEAAYLARRGALGLPEPRV
VERGRQVEGERFDRRLRAYAALRAAGSVPKSGFKFGADFRTYDGFTTVSEMDHSTRLIRV
VSPAHTFLPRDLSLDVRLAGGVRKRMVFALTDVNEGIDWLSVARLTP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggacgttcgagggcggcaccgttcgggtcggcggcgacgcccgccagcgcttc
tacgacgcgcgggggtacggccggccactcgacggcaaccggatcgaactcgcgcccgtc
gaggccgcccacctcctctttcggggtgacctcgacggcgtcgtcggtcccgacggcgag
acgatggccttccgggccttcctcaccgcggccgacgccgtcctcaccttcgtcgtctac
aaggacctccgcgaccggggcttctacctctcgcccacccgcgagggatgggtcgacgac
cccgcgggcgcggacctcgtggtctacccccgcgggaaggggccggccgacgacgaggtg
gcccatcgggtccgcgtcgccggcgaacgcgaggagattctcgccgccgacctcggggac
gtggtcctcgccgtcgtcgacgaggagggggaactcacgtacttcgagacggagcggatc
ggggcggcgggcgacgccgacgccgagatcgaccggtacgatccccccaccgacctcgac
gccgctctcctcgccgaccgggcggtcgtgtgggaccccccggccgacctccacgaccgc
gggttctacggtcagcgcctccacggccgaaacgccgaatccgggccgctccagctctct
ctcgtggaggcggcgtatctcgctcgccgcggcgcgctcggcctgcccgaaccccgcgtg
gtcgagcgcggccggcaggtggagggggagcgcttcgaccgccggctgcgcgcctacgcg
gcgctccgggcggcggggagcgtccccaagagcgggttcaaattcggcgccgacttccgc
acatacgacggcttcacgacggtctcggagatggaccactccacccgcctgatccgcgtc
gtctcgcccgcgcatacgttcctcccccgcgacctctcgctcgacgtgcggctggcgggc
ggggtccggaaacgaatggtttttgcgctgaccgacgtgaacgaggggatagactggctc
tcggtcgcccgactcacgccctaa
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