Halorhabdus sp. CBA1104: Hrd1104_00310
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Entry
Hrd1104_00310 CDS
T06289
Name
(GenBank) 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_00310
Enzymes [BR:
hala01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
Hrd1104_00310
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
Hrd1104_00310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Hydrolase
Hydrolase_6
Motif
Other DBs
NCBI-ProteinID:
QGN05885
UniProt:
A0A650A0S1
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Position
complement(51837..52826)
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AA seq
329 aa
AA seq
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MSDQARQVSDPDYHSEGHTAAQTCGWTDNALQGEGQCYKYAFYGIRSHRCIQMTPVVRCN
ERCVFCWRDHAGHTYELDDVQWDDPEAVVDASIALQRKLLSGYGGNSEVPRERFEEAMEP
RHVAISLDGEPTLYPHLPELIEAFHDRGITTFLVSNGTDPEMLAKCEPTQLYVSVDGADR
RTFDDVVKPVEDEAWGRLIETLDVLAAKDDTRTVLRTTLIDGYNMHRPAWYAGMAARADV
DFYELKAYMHVGHSRGRLDRSAMPDHADVIDFTEAVGEHLPEHDVIKESADSRVAMLARK
EDTWVEKLAPESDFWEQEAADWTPKGGRP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaggcccgccaagtctccgatcccgactaccacagcgagggccacactgct
gcccagacctgcgggtggaccgacaacgccctccaaggtgagggccagtgctataagtac
gccttctatggcattcggtcccaccggtgtatccagatgacacccgtcgtccggtgtaac
gagcgctgtgtcttttgctggcgcgatcacgccggtcacacctacgaactcgacgacgta
cagtgggacgaccccgaagcggtcgtcgacgcctcgatcgccctccagcggaaactcctc
tcgggctatggcggcaacagcgaggttcccagagagcgcttcgaggaggcgatggagcca
cgccacgttgcgatttccctggacggcgagccaacactgtacccccacctgccggaactg
atcgaggcctttcacgaccggggcattacgacgtttctcgtctcgaacggcaccgatccc
gagatgctggcgaagtgtgagcccacccaactgtacgtctccgtcgacggggccgatcgg
cggaccttcgacgatgtggtcaagcccgtcgaggacgaggcctgggggcggttgatcgag
acgctggacgtcctcgccgcgaaggacgacacccggacggtcctccggacgacgctgatc
gacggctacaacatgcatcgaccggcgtggtacgccggcatggccgcacgcgcggatgtc
gacttctacgagctaaaggcctacatgcacgtcggccactcccggggccgactcgaccga
tcggcgatgcccgaccacgccgacgtgatcgatttcaccgaggccgtgggcgagcatctg
cccgagcacgacgtcatcaaagagtcggccgattctcgggtcgcgatgctggcccgcaaa
gaggacacctgggtggagaaactcgcacccgagagtgacttctgggagcaggaagcggcc
gactggacgccgaaaggcgggcggccctga
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