Halorhabdus sp. CBA1104: Hrd1104_03720
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Entry
Hrd1104_03720 CDS
T06289
Name
(GenBank) PAS domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hala03000
]
Hrd1104_03720
Transcription factors [BR:
hala03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hrd1104_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
PAS
GAF_3
PAS_4
Response_reg
PAS_3
GAF_2
PAS_8
OKR_DC_1_N
AfsA
Motif
Other DBs
NCBI-ProteinID:
QGN06490
UniProt:
A0A650A2R5
LinkDB
All DBs
Position
698467..700479
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AA seq
670 aa
AA seq
DB search
MSESAHGRRLLRVGSTPDGDPLPADVLRSRTGNVVVDTERDFSAALSRVESGAVDCVIAD
HASDGFDGLSLLEAIRRERPNFPVFLLPATESGAVARRAVSADVTAFLPQSSPELVDQVL
QALDDAVPETREDRVRMPIHDRTATEEQRLKERALDEAPVGITIGDATEPDEPLIYVNDS
FEAITGYDKEEAIGVNCRFLQGADTDAETTVDIREAVENTESVSAELLNYRADGSTFWNN
LAISPIRDDDGNVTNFVAFQQDVTERKEAEAAIREERETLRRLLDRVEGLVSDLSEILVR
ADNRDEIHRMTVSRLGSVAKFDRAWIGTYDPTTHTVSIAAHNQDRLGEQTIALDADRPSA
DRLAATLEADEIQRLEDAATLDPPLGFESGQAGSGVLIPLSYRRTTYGVLAVFDADPEAF
DGTERAILGALGRVIGAAINDVLSKRTLTTDVTITIEVDLHDPSLFLADLASTATDPIAY
RGTQVHDDGRVAFLFAVSAADEDTILAAEDRYEAVTDVSVLSRAGEQLVVEIITAGAEFV
DALASYGANVGTVAIDSQSVRVRFTVATEQNGRAIVEALETAYEDVELIAYHESGDAKQA
PRSFAEAVEADLTDRQLTALQKAYTSGFFEWPRQCEGEDLAASMDVVPSTYYQHLRTAEK
KLMRAFFEDD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcagcccatgggcgccgcttgctgcgtgtcgggagtacccccgacggcgac
cccttgccggcggacgtgttacgttcccggacggggaacgtggtcgtagacacagaacgg
gacttctctgctgcgctctcgcgggtcgaatccggggcggtcgattgtgtgatcgccgat
cacgcttcggatgggttcgacggtctgtcgctgctcgaagcgattcggcgggaacggccg
aactttccagtgtttttgcttccagcgaccgagagtggtgctgtcgcacgacgcgctgtc
agcgctgacgtcacggcgtttctcccccaatcctcaccggagttggtcgatcaagtacta
caggcactcgacgacgctgtcccggagactcgcgaggatcgagtcaggatgccgatccac
gaccggaccgcgaccgaagagcaacgcctcaaagagcgcgccctggacgaggcaccggtc
ggcatcacgatcggtgatgccaccgaaccggacgaaccgctcatctacgtcaacgattcc
ttcgaagcgatcaccggctacgacaaagaggaggccatcggtgtcaactgtcggttcctc
cagggcgcggataccgacgccgaaacgaccgtcgacatccgtgaagccgtcgagaatacc
gaatcggtgtcggccgaactgttgaactaccgggcggacggttcgacattctggaacaat
ctggccatctcaccgatccgggacgacgacggcaacgtgacgaacttcgtcgctttccag
caggacgtgaccgaacgcaaggaggccgaggctgcgatccgcgaagaacgagaaaccctc
cgtcggctgctcgatcgcgtcgaggggctggtcagtgacctctcggagattctggttcgg
gcggacaatcgggacgaaattcaccggatgaccgtcagccgactcggctcggtcgcgaag
ttcgatcgggcctggatcggcacgtacgatccgaccacccataccgtctccatcgcggcg
cacaaccaggaccgtctcggggagcagacgatcgcactcgatgcagaccgtccgagcgcc
gaccgtctcgcggcgaccctcgaagcagacgagatccagcgactcgaagacgcggcgacg
ctggacccgccgctcggattcgaatcaggacaggctggatcgggtgtcctcattccactg
tcctaccgccggacgacctacggcgtcctcgcggtgttcgatgccgacccggaagcgttc
gacgggaccgaacgggcgatcttgggggcgcttggccgggtgatcggggcggcgatcaac
gacgtcctcagcaagcggacgctcacgaccgacgtgacgattacgatcgaagtcgacctg
cacgatccatcgctgttcctcgcggacttggcgagtacggcgaccgatcccatcgcctat
cgcggtacccaggtccacgacgacggccgcgtcgcgtttctgtttgccgtctccgcggcc
gacgaggacactatcctcgcggccgaggaccggtacgaggctgtcacggacgtctcggtc
ctttcgagggctggtgagcaactagtcgtcgagatcatcacggctggagcggagttcgtc
gatgcgctcgcaagctacggggcaaacgtcggcactgtcgccatcgacagccaaagtgtc
cgcgtccggtttacggttgcgaccgaacagaacggccgggcgatcgtcgaagcactcgaa
acagcctacgaggacgtcgaattgatcgcgtatcacgagtccggagacgccaagcaggcc
ccccgatcgtttgccgaagctgtcgaggctgacctcaccgatcggcagctgacggcgctg
caaaaagcctacaccagcggctttttcgagtggccccgccagtgtgagggagaggatctc
gcggcgtcgatggacgtggtgccctcgacgtactaccagcacctcagaacggccgaaaag
aaactcatgcgagcgttcttcgaagacgactga
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