KEGG   Haloferax alexandrinus: G3A49_10940
Entry
G3A49_10940       CDS       T06450                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hale  Haloferax alexandrinus
Pathway
hale03030  DNA replication
hale03410  Base excision repair
hale03420  Nucleotide excision repair
hale03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hale00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G3A49_10940
   03410 Base excision repair
    G3A49_10940
   03420 Nucleotide excision repair
    G3A49_10940
   03430 Mismatch repair
    G3A49_10940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hale03032]
    G3A49_10940
   03400 DNA repair and recombination proteins [BR:hale03400]
    G3A49_10940
Enzymes [BR:hale01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     G3A49_10940
    6.5.1.6  DNA ligase (ATP or NAD+)
     G3A49_10940
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     G3A49_10940
DNA replication proteins [BR:hale03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    G3A49_10940
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     G3A49_10940
DNA repair and recombination proteins [BR:hale03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     G3A49_10940
   NER (nucleotide excision repair)
    Other NER factors
     G3A49_10940
   MMR (mismatch excision repair)
    Other MMR factors
     G3A49_10940
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QIB78627
UniProt: A0A6C0UTV5
LinkDB
Position
2211979..2213736
AA seq 585 aa
MQFAEFAARAAEIEAEPADLAVVSLLSDLFSDAGDDLPTVARFVQGRVFPAWDSTTLDIG
PRLCHEAIARAAGPNVSADDVEDRLADRGEIGAVAASYDFGGQRGLAAFGSGEQDGLTVA
EVDSELRALAAASGSGSEETKLKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGTVRDA
VAEAFLVAPADAAAIRDDDADSETEAAARERRNEAIAAVARALQVSNDYGMVAGLARDEG
ETGLDGVRLEVGRPVQAMLAQAGTAADALDEWGTAAVETKFDGARVQVHRDADGEVSLFS
RNMEDVTDALPEVVEFVAGAVDDPVILDGEVVAMDDGGEPLPFQEILRRFRRKHDVDRMR
EEVRVELRAFDCLHAAGDDLLTDPLAARHDRLTALLGDDSPAVSDLLLSDDPDEIAAYEA
DALDARHEGIMLKNPDAPYSPGDRGKNWLKRKPDVETLDLVVTGAEWGEGRRAEFLGTFL
LSARVEAESGDDAFETIGKVATGITDEELAELTDLLEPEIEREAGKEVDIRPSVVFEVGY
EEIQASPTYSSGYALRFPRFVTVREDKTAETADSLDRVERLADSQ
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgcagttcgccgagttcgccgcccgcgccgccgagatagaagccgagccagcggacctc
gcggtcgtctcgctcctctcagacctcttttcggacgccggcgacgacctcccgacggtc
gcccggttcgtccaaggtcgcgtcttcccggcgtgggactcgaccacgctcgacatcggc
ccgcggctctgccacgaggccatcgcccgcgccgccggcccgaacgtctcggccgacgac
gtggaggaccgcctcgccgaccgcggcgaaatcggcgcggtcgccgcgagctacgacttc
ggcggccagcgcggcctcgccgccttcggctcgggcgaacaggacggcctgaccgtcgcc
gaagtcgattcggagctccgcgccctcgcggccgcctccggctccggcagcgaggagacg
aagctcaagacgctctacggcctgttcaaccggaccgaccccgacgaggcgcgcttcctc
gcgcggctcgtcctctccgagatgcgcatcggcgtcggcgaggggaccgtccgcgacgcc
gtcgcggaggcgttcttggtcgcccccgcggacgccgccgccatccgcgacgacgacgcc
gactcggagaccgaagccgccgcccgggagcgccgaaacgaggccatcgccgccgtcgcc
cgcgccttgcaggtgtcgaacgactacggcatggtcgccggactcgcccgcgacgagggc
gaaaccgggctcgacggggttcgcctcgaagtcggccgccccgtgcaggcgatgctggca
caggccggcaccgccgccgacgcgctcgacgagtggggaaccgccgcggtcgagaccaag
ttcgacggcgcgcgcgtgcaggtccaccgcgacgccgacggcgaggtgtcgctgttttcg
cgcaacatggaggacgtgaccgacgcgctccccgaggtggtcgagttcgtcgccggcgcg
gtcgacgaccccgtcatcctcgacggcgaggtcgtggcgatggacgacggcggcgagccc
ctgccgtttcaggagattctccgtcgcttccgccgaaaacacgacgtagaccggatgcgc
gaggaggtccgggtcgaactccgggcgttcgactgcctgcacgccgcaggcgacgacctc
ctcaccgacccgcttgccgcccgccacgaccgactgaccgcgctcctcggtgacgactca
ccggccgtctcggacctgctcctctcggacgaccccgacgaaatcgccgcctacgaggcc
gacgccctcgacgcccgccacgagggtatcatgctgaagaaccccgacgcgccgtactcg
ccgggcgaccgcgggaagaactggctgaagcgcaagcccgacgtggagacgctggacctc
gtcgtcaccggcgcggagtggggcgagggtcgccgcgcggagttcctcgggacgttcctg
ctttcggcccgcgtcgaagccgagtccggggacgacgccttcgagaccatcggcaaggtc
gccacgggcatcaccgacgaggagttggccgagttgaccgacctcctcgaacccgaaatc
gaacgcgaggcgggcaaggaggtcgacatccgcccgtcggtcgtcttcgaagtcggctac
gaggagattcaggcctcgccgacgtactcctcgggctacgcgcttcggttcccgcggttc
gtcaccgtccgcgaggacaagaccgccgagacggccgactcgctggaccgcgtggagcga
ctggccgactcgcagtga

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