KEGG   Halobaculum halophilum: HUG10_03770
Entry
HUG10_03770       CDS       T06682                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
halg  Halobaculum halophilum
Pathway
halg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:halg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HUG10_03770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:halg03019]
    HUG10_03770
Messenger RNA biogenesis [BR:halg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HUG10_03770
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: QLG26713
UniProt: A0A7D5GYA6
LinkDB
Position
complement(718561..719913)
AA seq 450 aa
MEVEIATIGGYEEVGRQMTAVRAGDDIVVFDMGLNLSKVLIHDNVETEKMHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVASPFTIELVKQQIKGENK
FNVNNDLVKMEGGETMSIGDSGQVELEFVHVTHSIIDAINPVVHTPEGAVVYGLDKRMDH
TPVLEDPIDMERFREIGREGNGVLCYIEDCTNAGRKGRTPSESHARNHLEDTLNSIEDYD
GGIVATTFSSHVSRVSSLVEFAQDIGREPVLLGRSMEKYSGTAERLDFVDFPDDLGMYGH
RKSVDRTFKRIMKEGKENYLPIVTGHQGEPRAMLTRMGRGETPFELDDGDKVIFSARVIP
EPTNEGQRYQSEQLLRMQGARIYDDIHVSGHLREEGHYQMLDALQPQHLIPAHQDLKGFA
PYVDLASNMGYSLGRDIHVTQNGNMIQLTE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaagtagaaatcgcaacaatcggtggctacgaggaagtcggccgccagatgacggca
gttcgcgcaggggacgacatcgtcgtgttcgacatgggcctcaacttgagcaaggtcctg
atccacgacaacgtcgagaccgagaagatgcacagcctggacctcatcgacatgggggcc
atcccggacgaccgcgtcatgtccgacctcgagggcgacgtgcaggccatcgtgccgacg
cacggccacctcgaccacatcggcgccatctcgaagctggcccaccggtacgacgcgcca
gtcgtcgccagcccgttcaccatcgagcttgtgaaacagcagatcaagggggagaacaag
ttcaacgtcaacaacgacctcgtcaagatggagggcggcgagacgatgtccatcggcgac
tccgggcaggtcgaactcgagttcgtccacgtcacccactccatcatcgacgcgatcaac
ccggtggtccacacgcccgagggcgccgtcgtctacggcctcgacaagcgcatggaccac
acgccggtgctggaggacccgatcgacatggagcggttccgcgagatcggccgcgagggg
aacggcgtcctctgctacatcgaggactgcacgaacgcgggccggaagggccggacgccg
tcggagtcgcacgcacgtaaccacctcgaggacaccctcaacagcatcgaggactacgac
ggcggaatcgtcgccaccacgttctcctcccacgtgtcccgcgtctcctcgctcgtcgag
ttcgcccaggacatcgggcgcgagccggtgctgctcggccgctcgatggagaagtacagc
ggcaccgcggagcggctggacttcgtggacttcccggacgacctcgggatgtacggtcac
cgcaagtccgtcgaccgcacgttcaagcgcatcatgaaggaggggaaggagaactacctc
cccatcgtcacgggccaccagggcgagccgcgcgcgatgctcacccggatgggtcgcggc
gagacccccttcgaactggacgacggcgacaaggtcatcttcagcgcccgggtcatcccg
gagcctacgaacgagggccagcgctaccagtccgaacagctcctccggatgcagggtgcc
cgcatctacgacgacatccacgtgtcgggccacctccgcgaggagggccactaccagatg
ctcgacgcgctccagccccagcacctcatcccggcccaccaggacctcaaggggttcgcg
ccgtacgtcgacctcgcgagcaacatgggctactcgctcgggcgtgacatccacgtgacg
cagaacggcaacatgatccagctgacggagtga

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