Halobaculum halophilum: HUG10_03770
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Entry
HUG10_03770 CDS
T06682
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
halg
Halobaculum halophilum
Pathway
halg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUG10_03770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halg03019
]
HUG10_03770
Messenger RNA biogenesis [BR:
halg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUG10_03770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QLG26713
UniProt:
A0A7D5GYA6
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All DBs
Position
complement(718561..719913)
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AA seq
450 aa
AA seq
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MEVEIATIGGYEEVGRQMTAVRAGDDIVVFDMGLNLSKVLIHDNVETEKMHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVASPFTIELVKQQIKGENK
FNVNNDLVKMEGGETMSIGDSGQVELEFVHVTHSIIDAINPVVHTPEGAVVYGLDKRMDH
TPVLEDPIDMERFREIGREGNGVLCYIEDCTNAGRKGRTPSESHARNHLEDTLNSIEDYD
GGIVATTFSSHVSRVSSLVEFAQDIGREPVLLGRSMEKYSGTAERLDFVDFPDDLGMYGH
RKSVDRTFKRIMKEGKENYLPIVTGHQGEPRAMLTRMGRGETPFELDDGDKVIFSARVIP
EPTNEGQRYQSEQLLRMQGARIYDDIHVSGHLREEGHYQMLDALQPQHLIPAHQDLKGFA
PYVDLASNMGYSLGRDIHVTQNGNMIQLTE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaaatcgcaacaatcggtggctacgaggaagtcggccgccagatgacggca
gttcgcgcaggggacgacatcgtcgtgttcgacatgggcctcaacttgagcaaggtcctg
atccacgacaacgtcgagaccgagaagatgcacagcctggacctcatcgacatgggggcc
atcccggacgaccgcgtcatgtccgacctcgagggcgacgtgcaggccatcgtgccgacg
cacggccacctcgaccacatcggcgccatctcgaagctggcccaccggtacgacgcgcca
gtcgtcgccagcccgttcaccatcgagcttgtgaaacagcagatcaagggggagaacaag
ttcaacgtcaacaacgacctcgtcaagatggagggcggcgagacgatgtccatcggcgac
tccgggcaggtcgaactcgagttcgtccacgtcacccactccatcatcgacgcgatcaac
ccggtggtccacacgcccgagggcgccgtcgtctacggcctcgacaagcgcatggaccac
acgccggtgctggaggacccgatcgacatggagcggttccgcgagatcggccgcgagggg
aacggcgtcctctgctacatcgaggactgcacgaacgcgggccggaagggccggacgccg
tcggagtcgcacgcacgtaaccacctcgaggacaccctcaacagcatcgaggactacgac
ggcggaatcgtcgccaccacgttctcctcccacgtgtcccgcgtctcctcgctcgtcgag
ttcgcccaggacatcgggcgcgagccggtgctgctcggccgctcgatggagaagtacagc
ggcaccgcggagcggctggacttcgtggacttcccggacgacctcgggatgtacggtcac
cgcaagtccgtcgaccgcacgttcaagcgcatcatgaaggaggggaaggagaactacctc
cccatcgtcacgggccaccagggcgagccgcgcgcgatgctcacccggatgggtcgcggc
gagacccccttcgaactggacgacggcgacaaggtcatcttcagcgcccgggtcatcccg
gagcctacgaacgagggccagcgctaccagtccgaacagctcctccggatgcagggtgcc
cgcatctacgacgacatccacgtgtcgggccacctccgcgaggagggccactaccagatg
ctcgacgcgctccagccccagcacctcatcccggcccaccaggacctcaaggggttcgcg
ccgtacgtcgacctcgcgagcaacatgggctactcgctcgggcgtgacatccacgtgacg
cagaacggcaacatgatccagctgacggagtga
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