Halobaculum halophilum: HUG10_12480
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Entry
HUG10_12480 CDS
T06682
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
halg
Halobaculum halophilum
Brite
KEGG Orthology (KO) [BR:
halg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halg03016
]
HUG10_12480 (thpR)
Enzymes [BR:
halg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HUG10_12480 (thpR)
Transfer RNA biogenesis [BR:
halg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HUG10_12480 (thpR)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QLG28311
UniProt:
A0A7D5GIP5
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All DBs
Position
complement(2481896..2482453)
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AA seq
185 aa
AA seq
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MPRLFVALDLPDGLADEFAALRDDAPDAPSLSFTDPTDAHVTVKFLGDTPEDELDDLLDA
LERAVADADVGSFPVEVGGLGAFPSEEYIRVVWTGVREGADELTRLHEAVERETTALGFD
PEEHEFTPHLTVARMSDARGKDAVQRFLRGNDPDVGWFEATELRLKASELSSEGPTYRTV
AWFEV
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgccacggctgttcgtcgcgctcgacctcccggacggactcgccgacgagttcgccgcc
ctccgggacgacgccccggacgcgccgagcctctcgttcaccgacccgaccgacgcgcac
gtgacggtgaagttcctcggcgacacccccgaggacgaactcgacgacctgctcgacgcg
ctggaacgcgccgtcgccgacgccgacgtggggtcgttcccggtcgaggtgggcggactc
ggcgcgttcccgagcgaggagtacatccgggtcgtctggaccggggtccgggagggcgcc
gacgaactgacgcggctccacgaggccgtcgagcgcgagacgaccgccctggggttcgac
cccgaggagcacgagttcacgccccacctgacggtagcgcggatgagcgacgcacggggg
aaggacgccgtccagcggttcctccgcgggaacgacccagacgtggggtggttcgaggcg
acggagctccggctgaaggcgagcgagctctcgtcggaggggccgacctaccggaccgtc
gcatggttcgaggtgtga
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