KEGG   Halodesulfurarchaeum formicicum HTSR1: HTSR_0684
Entry
HTSR_0684         CDS       T04517                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
halh  Halodesulfurarchaeum formicicum HTSR1
Brite
KEGG Orthology (KO) [BR:halh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halh03400]
    HTSR_0684
Enzymes [BR:halh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HTSR_0684
    5.6.2.6  RNA 3'-5' helicase
     HTSR_0684
DNA repair and recombination proteins [BR:halh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HTSR_0684
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C Lhr_WH ResIII EAD2 AAA_19
Other DBs
NCBI-ProteinID: AOW79876
UniProt: A0A1D8S3D7
LinkDB
Position
646028..648733
AA seq 901 aa
MVTETPDSVPDPEAVPDGDLLQSLEPAVREWWIDQFGDSVEQNGGFFTPPQREAIPQIAA
GEHTLIASPTGSGKTLASFTAIINELFVRERAEGLENTVYCLYISPLKSLANDIHRNLTE
PLEGIAARRAEQGEDPSVIRHAIRHGDTEQAARQAMLDETPHILNTTPETLAILLNSPKF
KEKLRTVEYVIVDEIHSLAANKRGTHLSVSLERLETLADTAPTRIGCSATVEPLDTIGAF
LGGSEDGEPRDVELVDTRFMRDYDLELHTPAADLVETPRSVVRERFYDRLATLIDDHDST
LVFTNTRSGAERVLENLRERGAVDEDHSGAHHGSLSKERRQAVESALKEGTLDVVTTSTS
LELGIDMPHIDLVVQVGSPKSVASLLQRVGRAGHQLGETVTGRVFALDLQELIECTVMLE
RAKAGFVDRIRVPERAQDVAAQHVYGMAINGPRPLQEVEETLRRAYPYRDYTDAEFDNLL
RYLRAEYDGLEERNVYAKIWVDENDPPDGEHHYPEYPVGTRLIGKRGRLARMIYMTNLGT
IPDSFSCDVFVRSDDQWVGDLDEDYLDTLDPGDVFVLGGQRYEYRYRRGSKVYVDRTSER
ATVPSWYSERLPRSFDLGAEIAAFQDRLISLQEDGMAQLRRALRDLPIDEESVRALSRTV
DRQIAYAGPESVSTTDRIVVEHVTDRADYRRRYYVRVPYGRQVNDGLSRILAHQVANEAT
ANVTIAVDDTGFVLSMPLNRKVDVVGLLEGLDPDRAREHLEASLVGTDLRERYFRINATR
SLMILKRYKGHEKSASRQQVSAEMLLGFAEDLPDFVVLAETNREIVEDKLDFGHIEELLG
RIQAGELTVVSKTLDSPSPLSFGLATLSASDVVLAEDEDAALRAFHDRVTEAIEGASNGD
D
NT seq 2706 nt   +upstreamnt  +downstreamnt
atggtcacggagacgcccgactccgttccggaccccgaggcggtccccgatggggacctg
ttgcagtccctcgaaccggcggttcgggagtggtggatcgaccagttcggcgattcggtc
gagcagaacggcggctttttcacgccgccacagcgggaggcaatcccccagatcgccgcg
ggcgagcacacgctcatcgcgagtccgaccggctcggggaagacactcgcctcctttacg
gcgatcatcaacgagttgttcgtccgggaacgggccgagggcctggaaaacacggtttac
tgcctgtacatctcaccgctgaagtcactggcaaacgacatccatcgcaacctgaccgag
cccctggagggaattgccgctcggcgggccgaacagggcgaggacccctccgtgatccga
cacgcgatcagacacggtgacaccgagcaggccgcccggcaggccatgctcgatgagacg
ccacacatcctcaacaccacgccggagaccctggcaatcctgctcaactcaccgaagttc
aaggagaaactcaggacggtcgagtacgtgatcgtcgacgagattcacagcctcgcggcc
aacaaacggggcacgcatctctcggtgagcctggagcgactggagacactcgcggacacg
gcccccacccggatcggctgttcggccacggtcgaacccctcgacacgatcggggccttt
ctgggcggctccgaggacggcgagccacgcgacgttgaactggtcgacaccaggttcatg
cgggactatgacctcgaactgcacacgcccgcggcggacctggtcgaaaccccccgatcg
gtcgttcgggaacggttctacgatcggctcgcgacgttgatcgacgatcacgacagcaca
ctcgtgttcacgaacacccgctcgggagccgaacgcgtgctcgaaaacctccgggagcgg
ggagccgtggacgaggaccactcgggggcccatcacggctcgctctcgaaggagcgccgt
caggcggtcgagagcgcgttgaaggaggggactctggacgtggtgaccacctcgacgagc
ctggaactcggcatcgacatgccacacatcgatctcgtggtgcaggtcggctctcccaaa
tcagtcgcttcgctcctccaacgggtgggacgggccggtcaccagctcggcgagacggtc
acgggccgggtgttcgcgctcgacctccaggagttgatcgagtgtacggtcatgctcgag
cgggccaaagcgggctttgtcgaccgcattcgggtgcccgaacgcgctcaggacgtcgct
gcccagcacgtctatgggatggcgatcaacgggccgcgcccgcttcaggaggtcgaggag
acactccgccgagcttacccctatcgggactacaccgacgcggagttcgacaacctgctc
agatacctccgggccgagtacgacgggttggaggagcgcaacgtctacgcgaagatctgg
gtcgacgagaacgatccccccgacggcgagcaccactatccggagtacccggtcggcacc
agattgatcggcaagcggggtcggttggcccggatgatctacatgaccaacctcgggacg
atccccgattccttttcctgtgacgtgttcgtccggagcgacgaccagtgggtcggtgac
ctcgacgaggactatctcgacacgctcgatccgggtgacgtcttcgtcctcgggggccag
cggtacgagtatcgctaccgccggggatcgaaggtgtacgtcgatcggacgagcgagcgg
gcgacggtcccctcgtggtactccgaacgcctgccccgatccttcgatctgggagccgag
atcgcggcctttcaggaccggctcatctcccttcaggaagacgggatggcccagcttcga
cgggcgctccgggacctccctatcgacgaggagagcgtgcgagcactctcccggaccgtc
gacaggcagatcgcctacgccgggcccgagagtgtgagcaccaccgaccggatcgtcgtc
gaacacgtcaccgatcgggctgactatcgccgtcgctactacgtgcgagttccttacggc
cggcaggtgaacgacggcctctcacgaattttggcccaccaggtcgcgaacgaggccacc
gcgaacgtgaccatcgcggtcgatgacaccggcttcgtcctctcgatgccgctcaatcgg
aaggtcgacgtggtggggctgctcgaaggactcgatccggaccgggcccgcgaacacctc
gaagcgagcctggttgggaccgatcttcgcgagcggtacttccgcatcaacgcgacccgc
tccctgatgattctcaagcggtacaagggccacgagaagtccgccagtcggcagcaggtc
tccgcggaaatgctgcttggctttgcagaggacctgccggatttcgtggtcctcgcggag
accaaccgggagatcgtcgaggacaaactcgatttcggacatatcgaggaactgctcgga
cggatccaggcgggcgaactcacagtggtctcgaaaacactcgactcgcccagcccgctc
tccttcggcctggcgaccctatcggccagtgacgtggttctcgccgaagacgaggacgcc
gcactcagggcctttcacgaccgagtcaccgaggcgatcgagggggcgtcgaacggcgac
gattag

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