Haloarcula sp. JP-L23: G9465_02710
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Entry
G9465_02710 CDS
T06489
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
halj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_02710
09124 Replication and repair
03420 Nucleotide excision repair
G9465_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_02710
03400 DNA repair and recombination proteins [BR:
halj03400
]
G9465_02710
Enzymes [BR:
halj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
G9465_02710
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G9465_02710
DNA repair and recombination proteins [BR:
halj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G9465_02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
AAA_34
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
QIO21329
LinkDB
All DBs
Position
complement(562220..564400)
Genome browser
AA seq
726 aa
AA seq
DB search
MATTDDGYFRFFPYEEPYDHQREAMATIYDALDDGRDVLFEGACGTGKTLASLVPALEHA
RETNKTVVITTNVHQQMRQFVEDARAITDHEDLRAVVFRGKGSMCHIDVDYEECQALRDT
TRELVDVEGDIADLERREGELLQAGQSGDSEAMEARSAVVEELRDLQEQRDELESERSTC
DHYYRNLTVDTTEFYAWLYDDVRTPDDVYEYADDHGLCGYELLKEGMDGVDLVVCNYHHL
LDPTIREQFFRWLGREPEDVVAVFDEAHNVESAARDHARRTLTENTLDQALDELAESEDA
RADGAANVLETFRDALVETYEDSFGFGDREAVDEHWDDVTVANHDKKDDLTLSFFRGYTG
PGFHEEVDQALDLGRELDATYEEQFKEGELDTRKECQTLQAAAFLSAWLAESDEAGQYPV
VSVRRDESTDEVYGRAELYTCIPEQVTRDLFDDLHAAVLMSATLRPFDVTEDVVGLSDPV
TMAYGAQFPEERRRTYAVDGPALFSSERDNPETQRTIARTLADVIRFTPGNTLVFCPSYS
EARRYHDMVAVSGTRYLDEPGTQARDLREAFTDDDGAVLFTSLWGTLAEGVSYDGDDART
VVVLGVPYPHLDDRMEAVQDAYATAFGDEDTEEAGWRYAVEIPTVRKTRQALGRVVRSPE
DFGARVLLDKRYTEHAEMDMRDYAVRGAFPPEERREMVDIGPEKLKFALLNFYQDMGAYD
GPPPKP
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacgacagacgacggctacttccgcttttttccctacgaggagccgtacgaccac
cagcgcgaggcgatggccaccatctacgacgccttagacgacggtcgggacgtcctcttc
gagggggcctgtggcaccggcaagacgctggcctcgctcgtcccggcgctggaacacgcc
cgcgagacgaacaagacggtggtcatcacgacgaacgtccaccagcagatgcgccagttc
gtcgaggacgcccgcgccatcaccgaccacgaggaccttcgcgcggtcgtcttccgtggc
aaggggtcgatgtgtcacatcgacgtcgactacgaggagtgtcaggccctgcgcgacacc
acccgcgaactggtcgacgtcgagggcgacatcgccgacctcgaacggcgcgagggggaa
ctgcttcaagcgggccagtccggcgacagcgaggccatggaggcccgtagcgccgtcgtc
gaggagttgcgggacctacaagagcaacgcgacgaactggagtccgaacggtcgacctgc
gaccactactaccggaacctgaccgtcgacaccaccgagttctacgcgtggctctacgac
gacgtgcgcacgcccgacgacgtgtacgagtacgccgacgaccacgggctgtgcggctac
gaactactgaaagaggggatggacggcgtcgatttggtggtgtgtaactaccaccacctg
ctagaccccaccatccgcgagcagttcttccggtggctcgggcgggagccagaagacgtc
gtcgccgtcttcgacgaggctcacaacgtcgagtcggcggcccgcgaccacgcccggcgt
accctcaccgagaacacgctcgaccaagcgctggacgaactggcggagtccgaagacgcc
cgggccgacggtgccgcgaacgtgctcgaaacgttccgcgacgcactggtcgagacctac
gaggactcctttggctttggcgaccgggaggccgtcgacgagcactgggacgacgtcacc
gtcgccaaccacgacaagaaagacgacctcaccctctcgttcttccgggggtacaccggc
cccggtttccacgaggaggtcgaccaagcgctggacctcgggcgcgaactcgacgctacc
tacgaggagcagttcaaggagggcgaactcgacacccgcaaggagtgtcagaccctgcag
gcggccgccttcctctcggcctggctggccgaatccgacgaagccggccagtaccccgtc
gtgagcgtccgccgggacgagagtaccgacgaggtgtacggccgggcggaactgtacacc
tgcatccccgaacaggtgacccgggacctgttcgacgacctgcacgcggccgtgttgatg
agcgcgacgctgcgcccgttcgacgtcaccgaagacgtcgtcggcctctcggacccggtg
acgatggcctacggcgcgcagttccccgaggagcgccgacggacctacgccgtcgacggg
cccgccctgttctctagcgagcgggacaaccccgagacccagcggaccatcgcccggacg
ctggcggacgtcatccggttcacaccggggaacaccctcgtgttctgtccgtcctacagc
gaggcccggcgctaccacgacatggtcgccgtcagcggcacccggtatctggacgaaccc
ggcacgcaggcgcgtgacctccgagaggcgttcaccgacgacgacggtgccgtcctcttc
acctcgctgtggggcaccctcgcggagggcgtgagctacgacggcgacgacgcccgcacc
gtcgtcgtcctcggggttccgtacccccatctggacgaccggatggaggcggtgcaggac
gcctacgcgacggcgttcggcgacgaggataccgaggaggccgggtggcgctacgccgtc
gagattccgacggtccgcaagaccagacaggcgctcggtcgggtggtccgctcgcccgag
gacttcggcgcgcgagtcttgctcgataagcgctacacggaacacgccgagatggacatg
cgcgactacgcggttcggggggcgtttccacccgaggaacgccgggagatggtcgacatc
ggcccggagaaactgaagttcgcgctgttgaacttctatcaggacatgggcgcctacgac
gggccgccgccgaagccatag
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