Halomicrobium sp. LC1Hm: LC1Hm_0425
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Entry
LC1Hm_0425 CDS
T06261
Symbol
lacZ
Name
(GenBank) Glycosyl hydrolase family 2
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00052
Galactose metabolism
hall00511
Other glycan degradation
hall00600
Sphingolipid metabolism
hall01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LC1Hm_0425 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
LC1Hm_0425 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LC1Hm_0425 (lacZ)
Enzymes [BR:
hall01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
LC1Hm_0425 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
DUF5719
Glyco_hydro_72
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
QGA81489
UniProt:
A0A5Q0UKZ9
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All DBs
Position
388834..391947
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AA seq
1037 aa
AA seq
DB search
MHDWIDPQVVSRNRLQPHTDVLPYPDRETALDGDRTATPWFRSLNGQWAFDLVPTPEDAP
ADFAEPGFDAGDWDDIEVPINWQAAGYGGPHYTNVIYPFPVDPPHVPTDNPTGCYRQTFH
VDEDWDGRQIRLHFEGVDSAFHLWVNGERVGYSEGARLPAEFDVSDAVEPGENTIAVRVY
KWTNGSYLEDQDMWWLSGIFREVYAYSVPETHVADIDVRTELDDDYVDADLSTAVDVTND
GTYAETRNVTATLRGPDGAVIAELEDTVHVNPGETETVSLDTTVTDPAKWTAETPTCYDL
AIELSADGDEMEVVHETVGFREVEMADGQFLVNGEAVTIRGVNRHDFHTDRGRHVPVDAM
REDIELMKRHNINAVRTAHYPNDSRFYDLCDEYGLYVIDETDIECHGLEEADETPHLSDA
AEWEATYVDRMVRMVERDKNHPSVVIWSLGNESDFGENHVAMAEDTRERDPTRPIHYEPD
TDQEVSDIVGPMYPLWEQLEEWVAEDGYEHPVIMCEYAHAMGNGPGSLNEYWELIYEHDR
LQGGFVWDWLDQGLRQTTAEGEEWFAYGGDFGDEPNDANFNINGLVFPDRTPSPGLTEYK
KVIEPVTLSAGKLAAGEVVVQNRYDFRDLDHLAADWRVEVDGELVESGTLSLPDLAAGES
ESVTVPVGDVTHDGESLLTVEITLAGGTAWADAGHTVATGQFELPDSGEPVLPTPRSGPL
STERTGDGIVVTGPDFELVFDNTHGVIDSLTYRDQDLLVDGPQVDLWRAPTDNDNGLPLD
GTLLSRLVELSEERTTLEPGQFWTIGFAQLWREHGLDSLQFRCDAVECEQFDDHVEIAVA
GRLAPPIFDHGFAVKQTYIVRDNGTIEIDTTLEPEGDLSVLPSLPRVGLDLTLSNALDTV
SWYGRGPGESYADSKQAQLVGRYERDVTDLHTPYVRPQANGTRTDVRWATFTDDRGVGLL
VTGDSELSVTAHRYTTEDLEAAEHDHELPERDEISVSLDHAHCGLGTGSCGPVTLDEYRV
APETFDFTVELRPFAAE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcacgactggatcgacccccaggtagttagtcgcaaccgactccaaccccacactgat
gtcctcccttacccggacagggagacagcactcgatggcgaccggacagccacaccgtgg
ttccgatcgctgaacggtcagtgggcctttgacctggtgccgacacccgaggacgcccca
gcggactttgccgaacctggcttcgacgccggtgactgggacgacatcgaggtaccgatc
aattggcaggctgccggctacggtgggccccactacacgaacgtcatctacccgttccca
gtcgacccaccccacgtcccgactgacaacccgacggggtgctaccggcagacattccac
gtcgacgaggactgggacggtcgacagattcgcctgcacttcgagggcgtcgactcggcc
ttccacctctgggtcaacggcgaacgcgtcggctacagcgagggcgcgcgtctccccgcc
gagttcgacgtgagcgacgccgtcgagcccggagagaacacgatcgccgtccgagtctac
aagtggaccaacggaagctacctcgaagaccaggacatgtggtggctcagcggcatcttc
cgggaggtctacgcctacagcgtcccggagacccacgtcgccgatatcgacgtccgcacc
gaactggacgacgactacgtcgacgccgatctctcgaccgccgtcgacgtcaccaacgac
gggacctacgccgagacccggaacgtgacagcgacgctcagaggtcccgacggggcggtg
atcgcagaactcgaggacacggtccacgtcaatcccggcgagacggagaccgtcagcctc
gacacgaccgtcacggaccccgctaagtggacggccgagacaccgacctgttacgacctg
gcgatcgaactgagcgcggacggcgacgagatggaggtcgttcacgagaccgtcggtttc
cgcgaagtcgagatggcagacggacagttcctcgtcaacggcgaggccgtgacgatccgg
ggggtcaaccgccacgacttccacaccgatcggggccgccacgtccccgtcgatgcgatg
cgtgaggacatcgaactgatgaaacggcacaacatcaacgccgttcgaacggcccactac
ccgaacgattcgcggttctacgatctctgtgacgagtacgggctctacgtgatcgatgag
actgacatcgagtgtcatggactggaagaagccgacgagacgccccacctcagcgacgcc
gccgagtgggaagcaacctacgtcgaccgaatggttcggatggttgagcgggacaagaac
caccccagcgtcgtgatctggtcgctcggcaacgagtcggacttcggcgagaaccacgtc
gcgatggccgaggacacccgagaacgggatccgacgagaccgatccactacgaacccgac
accgaccaagaagtgtcggacatcgtcgggccgatgtacccactgtgggagcagctagag
gagtgggttgccgaggatggctacgaacatcccgtaatcatgtgcgagtacgcccacgcg
atgggcaacgggcccggtagcctcaatgagtattgggagctgatctacgagcacgaccgc
ctgcagggtgggttcgtctgggactggctggatcagggcctacgacagacgacagccgag
ggcgaggagtggtttgcctacggcggggacttcggcgacgaacccaacgacgcgaacttc
aacatcaacgggctggtcttccccgaccgcacgccctcgccgggcctcacggagtacaag
aaagtcatcgaaccggtgacgctctctgcgggcaaactcgccgctggcgaggtcgtcgta
cagaatcgctacgacttccgcgacctcgaccacctcgccgccgattggcgcgtcgaggtc
gacggcgaactcgtagagagcggcacgctttcgctaccagacctggcggccggtgagagt
gagtccgtcacggtccccgtcggcgatgtgacacacgacggcgagtccctgctgaccgtc
gaaatcacgcttgccggcggaacggcgtgggccgacgccggccacaccgttgctacgggc
cagttcgaactccccgacagcggcgaaccagtgctcccgactccccggagcggccctctt
tccaccgagcggactggggacggcatcgtcgtcacaggtcccgacttcgaactggtgttc
gacaacacccacggcgtgatcgactcgctgacctaccgtgaccaggacctcctcgttgac
ggtccgcaggtcgatctctggcgtgcgccgaccgacaacgacaacggactcccactggac
gggaccctgctctcgcgactggtcgaactctcggaagagcggacgaccctagagccaggt
cagttctggacgatcggcttcgcccaactgtggcgcgaacacgggctagatagtctgcag
ttccgctgtgatgccgttgagtgcgaacaattcgacgaccacgtcgagattgcggtcgcg
ggtcgactcgcaccaccgatcttcgaccacggtttcgccgtcaagcagacgtatatcgtt
cgcgacaacggcaccatagagatcgacacgacgctcgaacccgagggcgacctatcggtc
ctgccctcgcttccgcgtgtcggtcttgacctgacgctgtccaacgctctcgacaccgtc
tcctggtacggccgtggacccggcgaatcctacgctgacagcaagcaggcacagctcgtc
ggtcgctacgagcgcgacgtgactgacctgcacacaccctacgtccggccacaggcgaac
ggcacccggaccgacgtgcgctgggcgacgttcaccgacgaccgcggggttggcctcctc
gtcaccggcgactcggagctctcggtgacggcccatcgttacacgactgaggacctcgaa
gcggccgaacacgaccacgaactgcccgagcgcgacgagatatcagtgtcgctcgatcac
gcccactgcggactgggcactggaagctgtgggccggtgacgctagatgagtatcgcgtc
gcccccgagacgtttgacttcaccgtcgaactgcgaccgttcgctgctgagtaa
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