Halomicrobium sp. LC1Hm: LC1Hm_3308
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Entry
LC1Hm_3308 CDS
T06261
Symbol
mph1-2
Name
(GenBank) ERCC4-like helicase
Organism
hall
Halomicrobium sp. LC1Hm
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
DEAD
RNA_helicase_helical
ResIII
HHH_5
HHH_2
HHH
Helicase_C_2
5_3_exonuc
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
QGA84325
UniProt:
A0A5Q0USZ9
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Position
3093997..3096549
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AA seq
850 aa
AA seq
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MAQSDADAGSTDGHVDHPLVTPELLEQRRYQRELADQALDDHTLVCLPTGLGKTTVSLLV
TAERIQDAQWKSLLLAPTKPLVQQHAEFYREALKVPDDEIVVFTGEVRPAKRSDLWADAR
VVIATPQVVENDLVGNRISLANVTHCTFDECHRATGDYAYNYIAERYHEDASDPLVTAMS
ASPGGDEEEILTVCENLGLREVAVMTEDDADVAEHTHDTELEWKRIELPETVLEIRDAIN
EVVSDRLAQLKEVGVTSTTQPDVSEREIQKIQGKLSELMDNDQSEGYSGMSLLAEVRKLR
TAVTYAETQSVEALRRYFERQKEAARSSGASKADQRLVSDPKVMEAMRKAENFTDLHPKF
RQTRMLLAETLGIENGERVIVFTESRDTAETLTDFLSDHFETEKFVGQSDTEGSEGMTQT
QQQETLDRFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRKGRTGRQTEG
RVVVLLAEDTRDEAYFWKSRQDEQRMEDELRTLKSVAGQLESKLGGEQAGVDEYNDGQSG
GERGEAPGEDGPDGDEGTASSGNDAGPSDAQRQPSEAPNTGERSEADGQTADSDGQAGLD
AFADGATGEDEDETADVPDETKGSTPEPHADGDETVAIVADQRELDSTIARDLSTREGVQ
TELETLAVGDYVLSDRVVVERKTVEDFLDTLTGGDRSMFEQVGDATRHYARPVVVVEGGD
LYGERNVHHKAIQGALASLAVDFGASVLRTNDEDETADLLETVARREQEESDREVSVHGE
KQAKTLGEQQEYVVASVAEVGPVTARAMLEQFGSVEAVMTADEDALKEVDGVGDVTAQRF
RDVVGSEFEG
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtccgacgccgacgcggggagcaccgacggccacgtcgaccacccgctggtg
acgccggaactactcgaacagcggcgctaccagcgcgagctggccgaccaggccctcgac
gatcacacgctggtctgtctcccgaccggcctgggcaagacgacggtctccttgctcgtg
accgccgaacggatacaggacgcgcagtggaagtccctcttgctcgcgccgacgaagccg
ctggtccagcaacacgccgagttctaccgggaggccctcaaggtgcccgacgacgagatc
gtcgtgttcaccggcgaggtccggccagccaagcgatcggacctctgggcggacgcccgc
gtcgtcatcgcgactccacaggtcgtcgagaacgacctcgtcggcaatcgcatctcgctg
gcgaacgtcacccactgcaccttcgacgagtgtcaccgggcgaccggcgactacgcgtac
aactacatcgccgaacgctaccacgaggacgcatcggatccgctggtgacggccatgtcg
gcctcgccgggcggcgacgaggaggagattctgacggtgtgtgagaacctcggcctgcgg
gaggtggcggtgatgaccgaggacgacgccgacgtggccgaacacacccacgacacggaa
ctggagtggaagcgcatcgagttgcccgagaccgtcctggagatccgggacgcgatcaac
gaggtcgtcagcgaccggctcgcacagctcaaagaggtgggcgtcacctcgaccacccag
ccagacgtctccgagcgcgagatccagaagatccaggggaaactctccgagctgatggac
aacgaccagagcgagggatacagcgggatgagcctgctggccgaggtccgaaagctccgc
acggccgtcacctacgccgagacccagagcgtcgaggcgctgcgtcggtacttcgagcgc
cagaaggaggccgcccgctcgtctggagcctcgaaagccgaccagcgactcgtctcggac
ccgaaagtgatggaagccatgcggaaagccgagaacttcaccgacctccacccgaaattc
cgccagaccaggatgttgctggccgagacgctgggcatcgagaacggcgagcgcgtcatc
gtcttcaccgagtcccgagacaccgccgaaacgctgaccgacttcctctccgatcacttc
gagaccgagaagttcgtcggccagagcgacaccgagggcagcgaggggatgacccagacc
cagcaacaggagaccctcgaccggttccgcgccggggagttcgaggtgctggtctcgacc
agcgtcgccgaggagggcctggacgtgccggaggtcgatctggtgttgttctacgagccc
gtgccgacggcgatcaggtccatccaacgcaaaggacggaccggccgccagaccgagggt
cgcgtcgtcgtcctgctggccgaggacacccgcgacgaggcgtacttctggaagtcccgg
caggacgagcagcgcatggaggacgaactccgcacgctgaagagcgtcgccggccagcta
gagtcgaaactggggggtgagcaggctggcgtcgacgagtacaacgacggccagagcggc
ggagagcgtggcgaagcgcccggagaagacggtccagacggcgacgaaggcaccgcttcg
agtggaaacgacgccggtccgtccgacgctcagcgccagccctcggaagcgccgaacacg
ggcgagcgatccgaagccgacggccagaccgccgacagtgacggacaggccggtctcgat
gccttcgccgacggcgcgaccggggaggacgaagatgagacagccgacgttccagacgaa
acgaaggggtcgacgccggagccacacgccgacggcgacgagaccgtcgcgatcgtcgcc
gaccagcgcgaactcgactcgacgatcgcacgcgatctctcgacccgcgagggcgtccag
acggaactggagacgctggcggtcggggactacgtgctctcggatcgggtcgtcgtcgag
cgcaagaccgtcgaggacttcctcgatacgctgaccggcggcgaccggtcgatgttcgaa
caggtcggcgacgccacccgtcactacgcccggccggtcgtcgtcgtcgaaggcggcgac
ctctacggcgagcgcaacgtccaccacaaggcgatccagggggcactggcctcgctggcc
gtcgacttcggcgcgagtgtcctccggacgaacgacgaggacgagaccgcagatctgctg
gagaccgtcgctcgccgcgagcaagaagagtccgaccgcgaggtcagcgtccacggcgag
aaacaggccaagacgctgggcgagcaacaggagtacgtcgtcgcctcggtggcggaagtg
gggccagtgactgcgcgggcgatgctggaacagttcgggagcgtcgaggccgtcatgacc
gccgacgaagacgccctcaaagaagtcgacggcgtcggcgacgtcacggcccagcggttc
cgggacgtagtggggagcgagttcgagggatga
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