Halomicrobium sp. LC1Hm: LC1Hm_4039
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Entry
LC1Hm_4039 CDS
T06261
Name
(GenBank) Elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hall03019
]
LC1Hm_4039
03016 Transfer RNA biogenesis [BR:
hall03016
]
LC1Hm_4039
03012 Translation factors [BR:
hall03012
]
LC1Hm_4039
04131 Membrane trafficking [BR:
hall04131
]
LC1Hm_4039
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hall04147
]
LC1Hm_4039
Messenger RNA biogenesis [BR:
hall03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
LC1Hm_4039
Transfer RNA biogenesis [BR:
hall03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
LC1Hm_4039
Translation factors [BR:
hall03012
]
Eukaryotic type
Elongation factors
LC1Hm_4039
Membrane trafficking [BR:
hall04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
LC1Hm_4039
Exosome [BR:
hall04147
]
Exosomal proteins
Proteins found in most exosomes
LC1Hm_4039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU_D3
Pkinase
PK_Tyr_Ser-Thr
GTP_EFTU_D2
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
QGA84374
UniProt:
A0A5Q0URY1
LinkDB
All DBs
Position
pLC1Hm-01:complement(48192..50657)
Genome browser
AA seq
821 aa
AA seq
DB search
MAADFEDIDAVPDPSSYDGPDVCALDYDDIQGGERIGSGGFARVSAVTVDGRQFVVKEPI
VDGTVETDTMAEFVDEAETWSQLDDHAHVVSVVDWGDRLPWIALEYMDGDTLADRLEAGR
MDTAQALWTGVCLSRALQHAHRHGIVHLDLTPDNVLFRATSDGVWDLPKIGDWGLSESLL
EQSETVDGLTPNYAAPEQFDPEAFGKPDDFTDRFQLATVVYEALTGKRAFPGSGMAAMRR
VTDGDVTPPTSVDPHLHDALDEIFARALATEKSERYETVVNFRRDLASVLETIVEESDRT
AGATGDTSETVESQHAEAATPPSTERHAEASGADRDRPTTLYEGIDDIDGVDASDAALLL
DTAEREIDGEPADDPLRLAVSDTFSVDGETHVSAAVASGTLSRDDRLVFEPGGAELSVGT
MEAGLSGTAIETATAGDSVTLVPDAATDRDDIRRGALGSRRSSAPKAVDSFEAELYVLDH
PSVITAGYTPVVHTHTGQVAASITGLTRRVMPVGDHGTWEIERTPDYAEPGDIVQASLSP
QRPFAVDPIDEAPETGWFTVRDAGQVVAIGAVTAVESAARPASTPEDDLVDRLTDCAFAP
QDHVERLAAQFEDATVPAAESATLRLPIQDAYTLSDAGTVLTGDVVAGTLEGGDDVWLRP
ADVAGAVETIEQNHEAIAQAGPGETVAFQVGGTEQGEVRRGAVCGPLDGAPPVADRLRAR
IVVTDHPSVVTAGYTPVVHAHTAQVACTIDSIEATVDPDDGRVIEERPDFIQNGDTAEVV
LEPQKPLSVEPITDVPELGVFSIRDMGQTVGVGGVIDVTEE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacttcgaagatatcgacgccgtgccggatccctcgtcgtacgatggaccc
gacgtttgcgccctcgactacgacgacatccagggcggggaacggatcggctctggtggg
ttcgccagggtgtccgccgtcaccgtcgacggacggcagttcgtggtcaaggaaccgatc
gtcgatggcaccgtcgagacggacacgatggcggagttcgtcgacgaggcagagacgtgg
tcacagctggacgaccacgcacacgtcgtcagcgtcgtcgactggggtgatcgtctcccg
tggatcgcgctggagtacatggacggcgacacgctcgcagaccgactggaggccggtagg
atggacacggcacaggccctctggaccggcgtctgtctcagccgtgctctccagcacgcc
caccgtcacggcatcgtccacctcgatttgactcccgataacgtgctcttccgggccacg
tccgacggggtgtgggatctccccaagatcggcgactggggactctccgagtcgctgtta
gagcagtccgagacggtcgacgggctgaccccgaactacgccgcccccgagcagttcgat
cccgaggcgttcggtaagccggacgacttcacggaccggttccagctcgcgacagtcgtc
tacgaggccctgaccgggaaacgggccttccccggttcggggatggcggccatgcgtcgg
gtcaccgacggcgacgtgacgccacccacgtccgtcgacccccacctccacgacgccctc
gacgagatcttcgcccgtgcgctcgccaccgagaagtcagaacggtacgagacggtcgtc
aacttccgccgagatctggcgtcggtgctcgaaacgatcgtcgaagagtccgatcggacg
gctggggcgaccggcgatacatcggagacggtcgagtcacagcacgccgaggcggccacg
ccgccctcaacagagcgccacgccgaggcgtccggtgccgaccgggaccgtcctacaacg
ctgtacgagggcatcgacgacatcgacggcgtcgacgcgtcggacgccgcgttgctcctc
gacactgcggagcgcgagatcgacggcgagccggcagacgatccgctccgtctggcggtc
agcgatacgttctccgtcgacggcgagactcacgtttccgccgcagtggcctcgggaacg
ctgtcgagagacgatcgtctcgtcttcgagccgggcggtgcggaactgtctgtcgggacg
atggaagcggggctctctggcactgcgatcgagacggcgacggcgggtgattcggtcacg
ctcgttccggacgccgccactgacagagacgacatccgacggggcgctctcggctctcgt
cggagctcggcccccaaggcagtcgactcgttcgaggcggagctgtacgttctcgaccat
ccgagcgtcatcacggcggggtacacgccggtcgtccacacccacaccggtcaggtcgcg
gcgtcgatcacggggctcacacggcgggtgatgcccgtaggcgaccacggtacgtgggaa
atcgagcggacgcccgactacgccgaaccgggcgacatcgttcaggcgtcgctctctccc
cagcggccgttcgccgtcgatccgatcgacgaggctccggaaacgggctggttcaccgtt
cgcgacgccggccaggttgtcgcgatcggcgctgtgaccgctgtcgagtccgcagcgcgg
ccagcgtcgacgcccgaggacgatctcgttgaccgactgaccgactgtgcgttcgctcca
caggaccacgtcgagcggctggcggcccagttcgaggacgcgacggttccggcggccgag
agcgccacgcttcggctcccgattcaggacgcgtacacgctctcggacgccgggaccgtg
ttgactggcgatgtcgtggcgggaacgctcgaaggcggcgacgacgtttggctccgtccg
gccgacgtagcgggcgcggtcgagacgatcgagcagaaccacgaggcgatcgcgcaagcg
ggtccgggtgagacagtcgccttccaggtcggtgggaccgagcagggcgaggttcgcaga
ggtgctgtctgtggtccgctcgacggtgcgccgccggtcgctgatcggctccgggcccgt
atcgtcgtcaccgaccatccgagcgtcgtcacggcggggtacacgccggtcgtccacgca
cacaccgcacaggtcgcctgtaccatcgacagtatcgaggccacggtcgatcccgacgac
ggacgtgtcatcgaggagcgcccggacttcatccagaacggcgacaccgccgaggtggtc
ctggaaccccagaagccactcagcgtcgaaccgatcaccgacgtgcccgaactgggcgtg
ttctcgatccgggacatgggacagacggtcggcgtcggcggggtgatcgatgtcaccgag
gagtga
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