Haloprofundus sp. MHR1: FCF25_05615
Help
Entry
FCF25_05615 CDS
T05952
Name
(GenBank) S1 RNA-binding domain-containing protein
Organism
halm
Haloprofundus sp. MHR1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
S1
Prp19
Motif
Other DBs
NCBI-ProteinID:
QCJ46627
UniProt:
A0A4D7H0T1
LinkDB
All DBs
Position
1109663..1111798
Genome browser
AA seq
711 aa
AA seq
DB search
MGTCIICGTPVEGRICDSHQEDVVFEFRGNEASQLTPGRFYSGVVDGYADFGVFVDLASG
VTGLLHRSELDRRLESLDWEPGDTVFVQVKNVRDNGNIDLGWSIRQSERDFRGALVQDAD
GDHDAAESDESGDTEDEVEPPTVRHGSASRDESSESDESDESDESSKSSESSGADDRTGD
AREGDDRTDGARGAESEPTADYERVEIGTLSDRVGQTVRIEGEVVSAQQTGGPTVFEVRD
ETGVVDAAAFVEAGVRAYPEVDVGSVVRLDGEVELRHNEIQVETEALVSLEGDDAETVQS
RLDDALRGRARPDDVTPLADHDAIAAVGTQLQDAAEEIRRAVFESRPVIVRHTATADGYV
AGAAVERAVLPLIREEHAKSDAEYHYFDRRPLEEAVYGMDAATNDVTRMLQDRDRHGEKL
PLVLLVGTGSTVESSDGLDLLSIYGAKRVVADAAAVDAEIEESTDVLVSPVLADADASDL
STGALVANLAAAVNDDVRDDLRHLPAVSYWEDAPQAYLDAATDAGYDETYVRELREAVAL
EAYYQSYEDKRELITDLLFDNGVTPNGEGENAGNLASHVSEQFRLKLDAEVETAKANLES
REAEGVQFAVLDTDAYTHRFDFPPTALLLDELHRREREGEKFVTVGVAMDELYLRSTADV
DLRAVAEAARERAPEAGITAVGIREGRIEFLSGRREQVKEAVVEAVAEQLA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgtgtatcatttgcggcacgcccgtcgagggccgaatttgcgacagccaccag
gaggacgtcgtgttcgagttccgtggtaacgaagcttcacaactaacccccggccgcttc
tacagcggcgtcgtcgacggctacgccgacttcggcgtgttcgtcgacctcgcgtcgggc
gtcaccggtctgctccaccgcagcgagctggaccgtcgattggagagtctcgactgggag
cccggagacaccgtcttcgtgcaggtcaagaacgtccgcgacaacggcaacatcgacctc
ggttggtcgattcgccagtccgagcgcgacttccgcggtgcgctcgtccaggacgcagac
ggtgaccacgacgcagcggagagcgacgagagcggcgacacggaggacgaagtcgagccg
ccgacggtccgacacggcagcgcttcccgcgacgagagcagcgaaagcgacgaaagtgac
gaaagcgacgagagcagcaagagcagcgagagcagcggggccgacgaccgaaccggcgac
gcacgcgagggcgacgaccgaaccgacggcgcacgtggggccgagtccgaacccaccgcc
gactacgaacgggtcgaaatcggcacgctgagtgaccgcgtcggccagaccgtccgcatc
gagggcgaggtcgtcagcgcccagcagaccggcgggccgaccgtcttcgaggtccgcgac
gagacgggcgtcgtcgacgccgccgcgttcgtcgaggcgggcgtccgcgcctaccccgag
gtcgacgtcgggtcggtcgttcgcctcgacggcgaggtcgaactccgccacaacgagatt
caggtcgaaaccgaggcactcgtctccctcgaaggcgacgacgccgagacggtccagtcc
cgcctcgacgacgcgctccgcggccgcgcgcgccccgacgacgtgacgccgctcgccgac
cacgacgccatcgccgcggtcggcacccagttgcaggacgccgccgaggagattcgccgc
gccgtcttcgagtcccgccccgtcatcgtccgccacaccgccaccgccgacggctacgtc
gccggcgcggccgtcgagcgcgccgtgctcccgctcatccgcgaggagcacgccaaatcc
gacgccgagtaccactacttcgaccgacgcccgctcgaagaggccgtctacggcatggac
gccgcgaccaacgacgtgacgcggatgctgcaggaccgcgaccgacacggcgagaaactg
ccgctcgtcctcctcgtcggcacgggttcgacggtcgaatccagcgacggactcgacctg
ctgagcatctacggcgccaagcgcgtcgtcgccgacgccgccgccgtcgacgccgagata
gaggagtccaccgacgtgctcgtctcgccggtgctcgccgacgccgacgcgtcggacctc
tcgacgggcgcgctcgtcgccaacctcgccgccgccgtcaacgacgacgtgcgcgacgac
ctgcgccacctccccgcggtgagctactgggaggacgccccgcaggcgtacctcgacgcc
gcgacggacgcgggctacgacgagacgtacgtccgcgaactccgcgaggccgtcgcgctg
gaggcgtactaccagtcctacgaggacaagcgcgaactcatcacggacctgctgttcgac
aacggcgtcacgcccaatggcgagggcgagaacgcgggtaacctcgccagccacgtctcc
gagcagttccgcctgaaactcgacgcggaagtcgagacggcgaaggcgaacctcgaatcc
cgcgaggccgagggcgtgcagttcgccgtcctcgacacggacgcgtacacccaccgcttc
gacttcccgccgacggcgctgcttctcgacgaactccaccgccgcgagcgcgagggcgag
aaattcgtcaccgtcggcgtcgccatggacgaactctacctccgcagcaccgccgacgtg
gacctccgagcggtcgccgaggccgcgcgcgaacgcgcccccgaggccggaatcacggcc
gtcggcatccgcgagggccgcatcgagttcctctcgggtcgccgcgaacaggtgaaggaa
gccgtcgtcgaagccgtcgccgagcaactggcgtag
DBGET
integrated database retrieval system
