Haloprofundus sp. MHR1: FCF25_07230
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Entry
FCF25_07230 CDS
T05952
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halm03016
]
FCF25_07230 (thpR)
Enzymes [BR:
halm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FCF25_07230 (thpR)
Transfer RNA biogenesis [BR:
halm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FCF25_07230 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QCJ46915
UniProt:
A0A4D7H4P3
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All DBs
Position
1453423..1453977
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AA seq
184 aa
AA seq
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MRLFVSIDLPRSLADAVAAVQDDLRDAEGLRFVDPTRAHLTLKFLGETDENRLEEVGEAL
ESAVDAADVDPFEATVGGLGVFPSLDYITVVWLGLEAGGERTTRLAEAVERETTAIGFEP
ESREFTPHVTLARMDDARGKDVVRRVVRGTEPTVGTFRVEKLRLKQSVLGPDGPEYSTVR
QFAL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtcagcatcgacctgccgcgttcgctcgccgacgccgtcgccgccgtc
caagacgatctccgtgacgccgaggggttgcgtttcgtcgacccgacgcgggcgcatctc
acgctgaagtttctcggcgaaaccgacgagaaccggctcgaggaagtcggggaagcgctc
gaatcggccgtcgacgccgcggatgtcgacccgttcgaggcgacggtcggggggttgggc
gtcttcccgtcgctcgactacatcaccgtcgtctggctcggcctcgaagcgggcggcgag
cggacgacgcgactcgccgaagccgtcgaacgggagacgaccgccatcgggttcgagccg
gagtcccgcgagttcacgccgcacgtgacgctggcgcggatggacgacgcccggggaaaa
gacgtggttcgacgagtcgttcgcgggacggaacccaccgtcgggacgttccgggtcgag
aagcttcgactgaagcagagcgttctcggccccgacggcccggagtactcgacggtgagg
cagttcgcgctctga
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