Halolamina sp. CBA1230: B4589_012260
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Entry
B4589_012260 CDS
T06651
Name
(GenBank) DEAD/DEAH box helicase
Organism
haln
Halolamina sp. CBA1230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
DEAD
RNA_helicase_helical
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QKY21107
UniProt:
A0A7D5CML8
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Position
2318981..2321434
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AA seq
817 aa
AA seq
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MAATDDVGRIDHPLLTPDFLEQRRYQLELAGTAKAAHTLVCLPTGLGKTTVSLLVTAERL
DTVGGKALMLAPTKPLVQQHAEFYREALQVPDDEIVVFTGDVSPDDRAELWDSATVVIAT
PQVVENDLVGNRVSLSDVTHVTFDECHRATGDYAYVYIAERYHADAADPLVTGMSASPGG
DEEEILQVCENLGLSEVEVMTEEDADVDEFTHDTDVQWERVELPEEILEMRELLNEVITE
RLEDLKELGVTNTTQPDLSQKKLNGMRAELQKLINNDQSEGYQGMSTHAEVMKLRRAVEL
VETQSVESVRRYFERQREDARSSGASKASQRMVSDPRVRRAMRKADTYDGLHPKFSQARI
LLAQTLGIGDGERVIVFTESRDTAEALTEFLGESFETRKFVGQGDKEGSDGMTQKQQQER
LEAFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRKGRTGRQAEGKVVVL
LAEDTRDEAFFWIARRREQEMEEELRELKGVADEVEEELDDGQQALSAFDGSPAMGGSGG
DGSASSADSADARDERLSPGLDDFAEQDGEDDADAEAADDAGADNTEEGVVATAESDPDE
AEIEIVVDQRELDSPIAKELSRREGVRTRLETLEVGDYVLSDRVAVERKSVADFLDTLTG
GDRSMFEQVGDLSRAYARPVVILEGEDLYSERNVHPNAIRGALSSLAIDFDASVLRTEDE
DDTADLLEVVAGREQEESDREVSVHGEKSGKTLAEQQEYVVGSVADIGPVTARALLAEFK
TVEAVMTAKKEDLMEVDGVGEVTADRLREVVGSEYTG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccgacgacgtcggccggatcgaccacccgctgctgacccccgacttcctc
gagcaacggcgctaccagctcgagctcgcgggcaccgcgaaggccgcccacacgctcgtc
tgtctccccaccggcctcgggaagacgacggtctcgctgctcgtcacggccgaacggctg
gacaccgtcggcgggaaggcactgatgctggcgccgacgaagccgctggtccagcagcac
gccgagttctaccgcgaagccctccaggttccggacgacgagatcgtcgtgttcaccggc
gacgtgagcccggacgaccgcgccgaactctgggactccgcgaccgtcgttatcgccacc
ccgcaggtcgtcgagaacgacctcgtgggcaaccgcgtctcgctgtcggacgtgacccac
gtcacgttcgacgagtgccaccgcgcgaccggcgactacgcctacgtctacatcgcggag
cgctaccacgccgacgccgccgacccgctcgtgacggggatgtccgcctcccccggcggc
gacgaggaggagatcctccaagtctgtgagaacctcgggctctcggaggtggaagtgatg
accgaggaggacgccgacgtcgacgagttcacccacgacaccgacgtgcagtgggagcgc
gtcgaactgcccgaggagatcttggagatgcgggagctcctgaacgaagtcatcacggag
cgactggaggatctgaaggagctgggcgtcaccaacaccactcagccggatctctcacag
aagaagctcaacgggatgcgcgcggagctgcagaagctgatcaacaacgaccagagcgag
gggtaccaggggatgagcacccacgcggaggtgatgaagctccgccgcgcggtcgaactg
gtcgagacccagtccgtcgagtccgtccggcgctacttcgagcgccagcgcgaggacgcc
cgctcctccggcgcctcgaaggccagccagcgcatggtgagcgaccctcgggtccgccgg
gcgatgcggaaagccgacacgtacgacgggctccaccccaagttctcgcaggcccgcatc
ctgctcgcccagacgctgggtatcggcgacggcgagcgagtcatcgtgttcaccgaatcg
cgcgacaccgccgaggcgctgacggagttcctcggcgagagcttcgagacccggaagttc
gtcgggcagggtgacaaggaggggtcggacgggatgacccagaaacagcagcaggaacgg
ctcgaagcgttccgcaacggcgagttcgaggtgctggtctccacctccgtcgccgaggag
gggctggacgtgcccgaggtcgacctcgtgctgttctacgagcccgttccgaccgcgatc
cgctccatccagcgcaagggccggaccgggcgacaggccgaggggaaggtggtcgtcctg
ctcgctgaggacacccgcgacgaggccttcttctggatcgcccgccggcgcgagcaggag
atggaggaggagctccgggagctgaaaggtgtcgccgacgaggtggaggaggagctggac
gacggtcagcaggcgctctcggcgttcgacggctcgccggcgatgggaggcagtgggggt
gacgggtcggcgtccagcgccgacagcgccgacgcccgcgacgaacggctctcccccgga
ctcgacgacttcgccgagcaggacggcgaggacgacgccgatgccgaggcggccgacgat
gccggggccgacaacaccgaggagggcgtcgtcgccaccgccgaatccgacccggacgag
gcggagatcgagatcgtcgtcgaccagcgcgaactcgactcgccgatcgcgaaggagctc
tcccggcgcgagggcgtccggacccgcctcgaaacgctggaggtcggcgactacgtgctc
tcggatcgcgtcgccgtcgagcggaagtcggtcgccgacttcctcgacacgctgaccggc
ggcgaccgctcgatgttcgagcaggtgggcgacctctcgcgggcgtacgcccggccggtg
gtgattctcgagggcgaggacctctacagcgagcgcaacgtccaccccaacgcgatccgc
ggcgcgctctcctcgctggcgatcgacttcgacgccagcgtgctccgcaccgaggacgaa
gacgacactgccgacctcctcgaagtcgtggcgggccgcgagcaggaggagagcgaccgc
gaggtgtcggtccacggcgagaagtcagggaaaacgctggccgaacagcaggagtacgtt
gtcggcagcgtcgccgacatcggccccgtcaccgcgcgggcgctgttggcggagttcaag
accgtcgaggcggtgatgaccgcgaagaaggaggatctgatggaagtggacggcgtcggc
gaggtgacggcggaccgactgcgggaagtcgtcggctccgagtatactggctga
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