Halarchaeum sp. CBA1220: EFA46_011100
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Entry
EFA46_011100 CDS
T06674
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
halr
Halarchaeum sp. CBA1220
Pathway
halr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
halr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EFA46_011100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
halr02000
]
EFA46_011100
Transporters [BR:
halr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EFA46_011100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QLC35225
UniProt:
A0A7D5HY41
LinkDB
All DBs
Position
pCBA1220-01:115946..117745
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AA seq
599 aa
AA seq
DB search
MAGAGAGMVSIAGCGGQNDDGTTTQGTTGSSDGSGGSGVADDSFANYVTANPTNWQFNHF
NFTQPFSHPMQTDMLQRWVISTNEFSDYAVSIDEFDSQNERAVLSVRDGLTWHNGDPGDP
VTGEDLMAWFVCHAAVNSTVAGLYNASDIEVTGERQIELPLDGSVNESIFRQSLNNFWLN
VPYHRYGEYVERFMDATSDEERNSVRTDLRSASFEEPFGNGPFKFVSRSSNRLRMELYEH
HPDADQINFDYWDVIRASTDTASVVLGMAPEGDIDMVRNFTPPQSVLNQAKQNDGLLTNQ
LPALWGQALPFNCGHEDFGNIRVRQAIAELIDRDLVSRNYGEFGVPVQAPSGLVGNINGQ
NEQTDRWTRWVTDEGEEQLHRYQNPERGRRLLREEGYTKQGGKWMRPDGTQLSMPIKVPA
GYTDWHPIYQTISSLLTDEGIDSEVKMIDATSYYPNHYLEGNYVAASTGWTLGRDNPWYT
FGQWFRPLADKVYKMNFKPTEVKVPPIGEPDGELQSVDVLQLFQNVRNASEENLQEAITE
FAWVANQFIPMLPILEINDTAWMTSDDWNWEPAKDDAAWQSKWPQWWFPRMGLMNAKSN
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccggtgcggggatggtgtcgattgcggggtgcggtggacagaacgacgac
gggaccacgacgcaggggaccacggggtcgagcgacgggtccggtggctccggcgtcgcg
gacgactccttcgcgaactacgtcactgccaacccgacgaactggcagttcaaccacttc
aacttcacccagccgttcagccacccgatgcagacggacatgctgcagcggtgggtcatc
tcgacgaacgagttctccgattacgccgtctccatcgacgagttcgacagccagaacgag
cgcgccgtcctctccgtccgcgacggactcacgtggcacaacggcgatcccggcgacccg
gtcaccggcgaggacctgatggcgtggttcgtctgtcacgccgccgtcaactcgacggtc
gccgggctgtacaacgcgagcgacatcgaggtcaccggcgaacggcagatcgaactcccg
ctcgacggctcggtcaacgagagcatcttccgccagtcgctgaacaacttctggctcaac
gtcccctatcaccgctacggcgagtacgtcgaacggttcatggacgcgacgagcgacgag
gagcgcaacagcgtccgtaccgacctccgaagcgcctcgttcgaggagccgttcgggaac
ggccccttcaagttcgtctcccgctcctcgaaccggctccggatggagctctacgagcac
cacccggacgcggaccagatcaacttcgactactgggacgtcatccgcgcctcgacggac
accgcgagcgtcgtcctcgggatggctcccgagggggacatcgacatggtgcgtaacttc
acgccgccacagtccgtcctcaatcaggccaaacagaacgacggcctcctgacgaaccag
ctccccgcgctctgggggcaggccctcccgttcaactgcgggcacgaggacttcgggaac
atccgcgtccgccaggccatcgccgagctcatcgaccgcgacctcgtctcgcgcaactac
ggcgagttcggcgtccccgtgcaggcgccgagcggcctcgtcggcaacatcaacgggcag
aacgagcagaccgaccgctggacgcgctgggtcacggacgagggcgaggaacagctccac
cggtaccagaaccccgagcgcggccgacgcctcctccgcgaggagggctacacgaagcag
ggcggcaagtggatgcgccccgacgggacgcagctctcgatgccgatcaaggtcccggcg
ggctacaccgactggcatccgatctaccagacgatctccagcctgctcactgacgagggc
atcgactccgaggtgaagatgatcgacgcgacgtcctactaccccaaccactacctcgag
gggaactacgtcgccgcgtcgaccgggtggacgctcggtcgcgacaacccgtggtacacc
ttcggccagtggttccgcccgctcgcggacaaggtgtacaagatgaacttcaagccgacg
gaggtgaaggtcccgcccatcggcgaaccggacggcgaactgcagagcgtcgacgtcctc
cagctcttccagaacgttcgcaacgcctccgaggagaacctccaagaggcgatcacggag
ttcgcgtgggtcgccaaccagttcatcccgatgctccccatcctcgaaatcaacgacacc
gcgtggatgaccagcgacgactggaactgggagcccgccaaggacgacgccgcgtggcag
tcgaagtggccgcagtggtggttcccgcgcatgggcctcatgaacgcgaagtcgaactga
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