Halocella sp. SP3-1: D7D81_02060
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Entry
D7D81_02060 CDS
T05769
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hals
Halocella sp. SP3-1
Pathway
hals00521
Streptomycin biosynthesis
hals00523
Polyketide sugar unit biosynthesis
hals00541
O-Antigen nucleotide sugar biosynthesis
hals01100
Metabolic pathways
hals01110
Biosynthesis of secondary metabolites
hals01250
Biosynthesis of nucleotide sugars
Module
hals_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D7D81_02060 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D7D81_02060 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D7D81_02060 (rfbC)
Enzymes [BR:
hals01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D7D81_02060 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZO93476
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Position
complement(443423..443974)
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AA seq
183 aa
AA seq
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MNIIKTDIEEVFIVESKVFGDHRGWFSETYSREKFKELGIEIEFIQDNHSYSAQKGTLRG
LHFQLNPKAQTKLVRCTKGKILDVVVDIREGSPTYKKWVSIELTEANKRQLFIPKGFAHG
FLALTDDVEVQYKVDEYYSSENDRSVKFDDPEIGIDWGITKPILSDKDFNAPKLRDSDAN
FKY
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattaaaacagatatagaagaagtctttatagttgaatctaaagtttttgga
gatcatagaggctggttttctgaaacatattcaagagaaaagtttaaagaactagggatt
gagattgaatttattcaagataatcactcatactcagctcaaaaaggaactttgaggggg
ttacattttcaactcaatcctaaagcgcaaacaaaacttgtaagatgtacaaaaggtaaa
attttagatgtagttgtggatattagggaaggctcacctacatataaaaaatgggtatct
atagagcttactgaagcgaacaaaagacaactatttatccctaaaggatttgctcatgga
ttcttagccttgacagatgatgtagaagtccagtataaagttgatgaatactactcatca
gaaaatgataggagcgttaaatttgatgatccagagattggaattgattggggaataact
aaacctatcctatcagataaagattttaacgcaccaaaacttagagacagtgatgcaaac
tttaaatattag
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