Ruania alkalisoli: IM660_02435
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Entry
IM660_02435 CDS
T06878
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
halt
Ruania alkalisoli
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Big_6
CarboxypepD_reg
Big_13
Motif
Other DBs
NCBI-ProteinID:
QOR71189
UniProt:
A0A7M1SUC4
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Position
586024..587889
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AA seq
621 aa
AA seq
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MSLAHDEPATAEPGSDQAIVDAVRAGRISEFALLYERYRAEAMRIARRSAASDDAADLVQ
ETFARVLRAIRNGGGPTQDVAGYIFRTLRNLRIDRGGRREAPSDDVEALGPPGLWVVDGE
AERSIDRRLVAEAFGELPPRWREVLWLTEVEGMGPGELSGRMGMKPTAIATLSSRARRGF
RSAWLQAHVRTGGVPIACRPFAARLGDYETGRLSPRRRLEVERHLESCDRCPAVVAELAA
VSERLGAAILPVVLLAPTSLWWVFGGVTKVGLVLAGTVKAAAWTLRDPKVALGAGAGTGT
TLIAAAALAVALTGEPPVETITTPPAPTPSASASPAPSRPDPDPVEDPTPVENATPDAES
PAEPPSPDPASPSPEPVAPTQPSSELSAPAVEPSPVALHAPPESPDAGAAAEPVDPVDPV
DPVDPVEELTVPPPPVITTMPASGLLVAPTITGTALPGALIALTGDDGSSTTTVVAGEDG
GWTLVPSSPAMNYHATQLMEAGGSEQYEGESEPSGPAGPFDYLVPTWQQPAPGSTAVLED
LDQDGEEDDLRILVMGESGAQVEVRTDGSLLGGVAIGPGVVGHHVIPDAEVGERTFEIRY
VDTETGAVGQVVSVTVTVVEP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgcgcacgatgagcctgctacggcggagcctggttccgatcaggcgatcgtc
gacgccgtgcgcgccggccgcatcagcgagttcgctctgttgtacgagcgttaccgcgca
gaggccatgcgcattgcccgccgcagcgccgcatctgacgacgcggccgacctcgtgcag
gagacgttcgctcgggtgctgcgcgcgatccgcaacggtggcggccccacgcaggatgtc
gccggctacatcttccgcaccttgcgcaacctccggatcgaccggggtgggcgtcgtgag
gccccctctgacgacgtcgaggcgctcggtcctcccggactgtgggtggtcgacggcgag
gcagagcgctcgatcgaccggcggttggtcgccgaggcgttcggagagctgccacctcgg
tggcgtgaggtgctgtggctcaccgaggtcgagggaatgggcccgggtgagctttccggc
cgtatgggaatgaagccgacggcgatcgccaccctgtcctcgcgagctcgccggggcttt
cggtcggcgtggctgcaggctcacgtgcgcacgggtggcgtgccgatcgcgtgccggccg
ttcgctgcccggctcggtgactatgagaccggccggctctctccgcggcgtcggctcgag
gtggagcgtcaccttgagtcgtgtgatcggtgcccggccgtggtcgccgagctggctgcg
gtctccgagcgtctcggggcggccatcctcccggttgtcctcctcgctcccacctccttg
tggtgggtctttggcggtgtcaccaaggtcgggctcgtgctggcggggactgtcaaggcg
gcggcctggacgctacgtgacccgaaagttgcgctcggcgccggggcggggacggggacc
acgctcattgccgccgcggcgttggctgtcgcgctcaccggcgagcccccggtggagacc
atcaccaccccgcccgcccccacccccagtgccagcgcgtcgccagcgccctcccgcccg
gaccccgatcctgtggaggatccgacccccgtcgagaacgcgacaccggatgcggaatcg
ccggccgaaccgccatctcccgatcctgcctccccgagcccggagccggtggcgccaacc
cagccctcgtccgaactgtccgcacccgcggtcgaacccagcccggtcgcgctgcacgcc
cctcctgaaagtccggacgccggggcagccgccgagccggtggacccggtagacccggtg
gacccggtagacccggtcgaggaactgacggtgccgccacccccggtgatcaccactatg
cccgcatctggcctgctcgtggcgcccacgatcacaggcacggcgcttcctggtgcgctg
atcgcccttacgggtgatgacggatcctccaccacgacggtcgtcgccggcgaggacggc
ggatggactctcgtcccgtcgtcacccgctatgaactaccacgcgactcagctcatggaa
gccggtggttcggagcagtacgagggtgagtccgagcccagtgggcccgccgggccgttc
gactacttggtgccgacctggcaacagcccgccccgggaagtactgctgtgctggaggac
ctcgaccaggatggtgaggaggatgacctccggatcctggtcatgggtgagagcggtgct
caagtcgaggtgaggaccgatggcagtctgctcggtggtgtggccatcggacccggtgtg
gtcggccaccacgtcatccccgatgccgaagttggtgaacgcaccttcgagatccgctat
gtcgatacggagaccggtgccgtaggtcaggtggtttccgtgacggtcaccgtcgtcgaa
ccctga
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