KEGG   Ruania alkalisoli: IM660_07650
Entry
IM660_07650       CDS       T06878                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
halt  Ruania alkalisoli
Pathway
halt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:halt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IM660_07650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:halt03019]
    IM660_07650
Messenger RNA biogenesis [BR:halt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IM660_07650
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_6
Other DBs
NCBI-ProteinID: QOR72103
UniProt: A0A7M1SZN6
LinkDB
Position
1754778..1756463
AA seq 561 aa
MSHPHPDLKPPGPLAPGALRIVPLGGLGEVGRNMAVLEFEGRLLVIDCGVLFPEDHQPGV
DLILPDFGYLEDRMDQVEAIVLTHGHEDHIGAVPYLLRLRKDIPLIGSKLSLAFVAAKLK
EHRIKPVLREVSEGQRRTFGVFDLEFVAVNHSIPDALAVAVRTPAGMVLHTGDFKMDQLP
LDSRITDLRAFARLGEEGVDLFMTDSTNAEVPGFTTSERDIGPVLDSVFAQAEGRIVVAS
FSSHVHRVQQVLDAADAHGRRVALVGRSMVRNMTIASELGYLNVPDGVLIDVKKIDDLPE
DRMVLMCTGSQGEPMAALSRIANRDHRVSVGPGDTVILASSLIPGNENAVFRIINGLIRL
GAKVVHQANARVHVSGHASAGELLYCYNIVRPKNVMPVHGEVRHLVANGALAVKTGVPPE
RVVLAEDGVVVDLVDGKAKIAGAVPCGYIYVDGSSVGGVTEAELKDRRILGEEGFISIFV
VVDSSSGEVVAGPELHVRGVAEGEDKLAAIVPEITKALTEAAAGGNADTHQLQQVVRRVV
GRFASSKLKRRPMIIPVVVES
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagccacccccaccctgacctcaagcccccgggtccgctggcaccgggcgcgcttcgg
atcgtcccgctcggcggtctcggcgaggtcgggcgcaatatggccgtgctggagttcgag
ggccgtctgctcgtcatcgactgtggcgtgctgttccccgaggatcaccagccgggcgtc
gatctcatcctgcccgacttcgggtacctcgaggatcggatggaccaggtcgaggcgatc
gtgctcactcacgggcacgaggaccacatcggtgccgtgccgtatctgctgcgactgcgc
aaggacatcccgctcatcggctcgaagttgtcgctggcgttcgtggccgccaagctcaag
gagcaccggatcaagccggtacttcgtgaggtttcggaggggcagcgccggactttcggg
gtgttcgatctcgagttcgtggccgtgaaccactcgatccccgatgcgctggccgtcgcg
gtgcgcacgccggcgggtatggtgctccacaccggtgacttcaagatggaccagctcccg
ctggactcacggatcacggacctgagggccttcgcccgcctcggcgaagagggtgtcgat
ctgttcatgaccgactcgacgaatgccgaggtgccgggtttcacgacctccgagcgcgac
atcggcccggtgctggactccgtgttcgcacaggcggagggccggatcgtggttgcttcc
ttctcctcgcacgtccatcgcgttcagcaggtgctggacgcggcagacgctcacggcagg
cgtgtggccctggtcggccggtcgatggtacggaacatgacgatcgcctccgagctcgga
tatctgaacgtgcctgacggagtgctgatcgacgtcaagaagatcgacgacctgcccgag
gaccgaatggtgctcatgtgcaccgggtctcagggtgagccgatggcggcgctgtcacgg
atcgcgaaccgggaccaccgagtctcggtcggcccgggggataccgtgatcctggcctcc
tccctcatccccgggaacgagaacgccgtcttccggatcatcaacgggttgatccgcctc
ggtgccaaggtcgtgcaccaggccaacgcccgtgtccacgtctccggacacgcctcagca
ggcgagctgctctactgctacaacatcgtgcgccccaagaacgtgatgccggtgcacggt
gaggtgcgtcatctcgtggcgaacggcgcgctcgccgtcaagaccggagtgccgcctgag
cgggtcgtgctcgccgaggacggcgttgtcgtcgacctggtggacggtaaggcgaagatc
gccggcgccgtcccgtgcgggtacatctacgtcgacggttcgtcggtcggaggtgtgacc
gaagccgagttgaaagatcgccggatcctcggcgaagaaggtttcatctccatcttcgtc
gtcgtcgactcctcgtccggagaggtcgtcgccggcccggagctgcacgttcgtggtgtc
gccgagggtgaggacaagctggctgcgatcgtgcctgagatcaccaaggcgctcaccgag
gctgccgcgggtgggaatgccgatacgcaccagttgcagcaggtggtgcgccgcgtcgtc
ggccgcttcgcctcgagcaagctgaagcggcgcccgatgatcattccggtggtcgtggag
tcctga

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