Halobaculum salinum: HUG12_19285
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Entry
HUG12_19285 CDS
T06744
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
halu
Halobaculum salinum
Brite
KEGG Orthology (KO) [BR:
halu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halu03009
]
HUG12_19285
Ribosome biogenesis [BR:
halu03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
HUG12_19285
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
RLI
AAA_21
AAA_16
AAA_23
AAA_22
Rad17
AAA
AAA_14
RNA_helicase
Fer4
nSTAND3
NB-ARC
Fer4_6
AAA_29
AAA_24
Fer4_10
Fer4_7
Fer4_9
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
QLG63751
UniProt:
A0A7D5LD27
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All DBs
Position
3813141..3814970
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AA seq
609 aa
AA seq
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MADDSIAVVDLDRCQPDRCNYECANFCPPNRTGKDCIVTRGEHYGEDEPYDGGPDQVWIS
EEICLGESCGICVEKCPFDAIEIINLPSELEDEPVHRYGDNAFALYGLPVPEPGSVTGIL
GPNGIGKSTAVKMLSGELTPNLGRHDEEANWDAVLDRFRGTELQNYVEKVIEGEVTVARK
PQYVDQIPKQFDGNTRELLEATDERGELDHLIERLNVAPVMDQDIDSISGGELQRVALAA
TLARDVDFYFLDEITPYLDIGQRMTAARLVRELAEDGERSMMVVEHDLAILDLLADTLHV
TYGEPGAYGVVTDPKSVRNGINEYLKGYLDNENMRIRPNAITFEEHAPRESVTGRPLFEY
PGLEKSYGEGEFSLTVEGGTVYESEVLGIVGPNGIGKSTMAKLFAGQLEPDAGELDFRMD
IAYKPQYIDIDRPMRVDAFLASITDQFGSSYWDTEIARPLQLNRIMEQNLTDLSGGERQR
VAIAACLSEDADLYLLDEPSAHLDVEQRVQATTAIRRYAENHDATVMVIDHDIYMVDLLA
DRLMVFDGEPAERGHASPPQEMREGMNDFLADLDVTFRRDERTGRPRINKPDSQLDREQK
REGEYYYSV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagcatcgcggtcgtcgacctcgacaggtgccagcccgaccgctgcaac
tacgagtgcgcgaacttctgtccgccgaaccgcaccgggaaggactgcatcgtcacccgc
ggcgagcactacggggaggacgagccgtacgacggcggccccgaccaggtgtggatctcc
gaggagatctgcctgggcgagtcgtgtggaatctgcgtcgagaagtgcccgttcgacgcc
atcgagatcatcaacctcccctcggagctggaggacgagccggtccaccgctacggcgac
aacgcgttcgccctctacggcctgccggtgcccgaacccggctcggtgacgggcatcctc
gggccgaacggcatcgggaagtcgaccgccgtgaagatgctctccggggagctgacgccg
aacctcggtcgacacgacgaggaggcgaactgggacgccgtcctcgaccgcttccgcggg
acggagctccagaactacgtcgagaaggtcatcgagggcgaggtgaccgtcgcccgcaag
ccccagtacgtcgaccagatcccgaagcagttcgacggcaacacccgggagctgctggag
gcgaccgacgagcggggcgaactggaccacctcatcgagcggctgaacgtcgcgccggtg
atggaccaggacatcgactccatctccggcggggagctccagcgggtcgcgctcgcggcg
acgctcgcgagggacgtggacttctacttcctcgacgagatcacgccgtacctcgacatc
ggccagcggatgaccgccgcgcggctcgtccgcgaactcgccgaggacggggagcgctcg
atgatggtcgtcgagcacgacctggccatcctcgacctgctggcggacacgctccacgtc
acctacggcgagcccggagcgtacggcgtcgtcacggaccccaagtcggtccggaacggc
atcaacgagtacctgaaggggtacctcgacaacgagaacatgcgcatccggcccaacgcc
atcaccttcgaggagcacgcgccccgcgagtcggtgaccggtcggccgctgttcgagtac
cccggcctcgagaagtcctacggcgagggcgagttctcgctgacggtcgagggcgggacg
gtgtacgagtcggaggtgctgggcatcgtcggcccgaacggcatcgggaagtcgacgatg
gcgaagctgttcgccgggcagctggagcccgacgcgggcgaactcgacttccggatggac
atcgcctacaagccgcagtacatcgacatcgaccggccgatgcgcgtggacgcgttcctc
gcctcgatcaccgaccagttcggctcctcctactgggacaccgagatcgcgcgaccactc
cagttgaaccggatcatggagcagaacctgacggacctctccgggggcgagcgccagcgc
gtcgccatcgcggcgtgcctctcggaggacgcggatctgtacctcctcgacgagccgtcg
gcccacctcgacgtggaacagcgcgtgcaggccacgacggccatccggcgctacgccgag
aaccacgacgcgacggtgatggtcatcgaccacgacatctacatggtcgacctgctggcc
gaccggctgatggtgttcgacggcgagccggccgagcgcgggcacgcgagcccgccccag
gagatgcgcgaggggatgaacgacttcctcgccgatctggacgtcaccttcaggcgcgac
gagcggaccgggcggccgcggatcaacaagcccgactcgcaactcgaccgcgagcagaag
cgcgagggcgagtactactactcagtttga
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