Halomonas alkalicola: B6N23_05935
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Entry
B6N23_05935 CDS
T09267
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
halw
Halomonas alkalicola
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
halw01002
]
B6N23_05935
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
halw01011
]
B6N23_05935
Peptidases and inhibitors [BR:
halw01002
]
Cysteine peptidases
Family C82
B6N23_05935
Peptidoglycan biosynthesis and degradation proteins [BR:
halw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
B6N23_05935
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WLI74442
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All DBs
Position
complement(1241575..1243206)
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AA seq
543 aa
AA seq
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MRPFVTILAILALMLSMSVGAQEAPREAPRGDLKAEIARLLAEMPAGEGAELRGFYAARD
HRAAWGERQRVAAFAEALETLESDGLDPRDYRADRLVAEHRRLQEANAGPAEQARFELAT
STLLLNALRHLQRGRLDPRAVDPQWEIPLEPARLDFEAISRAVDGQRFEQAFGEARPAYA
PYERLRSGLARYRNIERLGGWPGLPDTPRVLRAGDVDDAVAQLRRRLAMEGELEVMAADT
DAFPGAELQSPDPRRFDTALEAAVKRFQRRHLLEVDGVVGPPTRAALNVPVAARIDQIRV
NLERARWLLHGLPEAFVLVDIAGYRLSYFRPNGEIWQSRIVVGQPYRRTPSLRSEITHMT
VNPTWTVPPTILREDVLPRVRRDPSYLQSQNMRVLTPSGQRLDPWQVDWYNPGNVMIRQD
PGPQNALGQVVIRFPNDHLVYLHDTPAQGLFAREQRAFSSGCIRVEGVLAFAQLLFDDTG
SGQDVRALIASGQTRNVSLGRPMPVILHYWTVHPDENGQLVFRPDIYERDDALLRALDRP
LAL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcggccatttgtcaccatcctcgccatcctggcgctgatgctctccatgtcggtcggc
gcgcaggaggcgccgcgagaggccccgcgcggcgatctgaaggcagagatcgcccgcctg
ctggccgagatgccggccggggagggtgccgaactgcggggcttctatgccgcccgcgat
caccgcgccgcctggggggagcggcagcgggtggccgccttcgccgaggccctggagacc
ctggagagcgacgggctggacccgcgggactaccgcgccgaccgcctggtggccgagcat
cgccgcctccaggaggccaatgccggcccggccgagcaggcgcgcttcgagctggcgacc
tcgacgctgttgctgaacgccctgcgccacctgcagcgcggccgcctggatccgcgcgcg
gtggacccccagtgggagatccccttggagccggcgcgactcgacttcgaggcgatctcc
cgcgccgtggacggccagcgcttcgagcaggccttcggcgaggcgcgccccgcctatgcc
ccctacgagcgcctgcgcagcggcctggcccgctatcgcaatatcgagcggctgggcggc
tggcctgggctgcccgacacgcctcgggtgctgcgggcaggagacgtggacgacgccgta
gcgcagctgcgccggcggctggccatggagggggagctcgaggtgatggcggccgacacc
gacgccttccccggggccgagctgcagagcccggacccgcggcgcttcgataccgcgctg
gaagcggcagtgaagcgcttccagcgccgccacctgctggaggtagacggcgtggtgggc
cccccgacccgagcggcgctgaacgtcccggtggcggcgcgcatcgaccagatccgggtc
aacctggagcgcgcccgctggctgctgcacggcctgcccgaggccttcgtgctggtggat
atcgccggctatcggctcagctacttccgccccaacggcgagatctggcaatcgcgcatc
gtggtggggcagccctatcggcgtacgccatcgctgcgctccgagatcacccatatgacc
gtcaacccgacctggacggtgccgcctaccatcctgcgcgaggatgtgctgcccagggtg
aggcgggatccaagctacctgcagagccagaacatgcgcgtgctgaccccctcggggcag
cgcctcgacccctggcaggtggactggtacaaccccggcaacgtgatgatccgccaggat
ccggggccccagaatgccctggggcaggtggtgatccgcttccccaacgaccacctggtc
tatctgcacgatacgcctgcccaggggctctttgcccgggagcagcgcgccttcagctcc
ggctgcatccgcgtggagggggtgctggcgttcgcccagctgctgttcgacgataccggc
agcggccaggacgtgcgcgccctgatcgccagcggccagacccgcaacgtctccctgggc
cggcccatgccggtgatcctgcactactggacggtgcacccggacgagaatggccagctg
gtgtttcgcccggacatctacgagcgcgatgacgccctgctgcgggcgctcgaccgcccg
ctggcgctatag
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